Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.84■□□□□ 0.29
Shank1D3YZU1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.84■□□□□ 0.29
Shank1D3YZU1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
Shank1D3YZU1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.83■□□□□ 0.29
Shank1D3YZU1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.83■□□□□ 0.29
Shank1D3YZU1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shank1D3YZU1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Shank1D3YZU1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shank1D3YZU1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shank1D3YZU1 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.83■□□□□ 0.28
Shank1D3YZU1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.83■□□□□ 0.28
Shank1D3YZU1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Shank1D3YZU1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shank1D3YZU1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shank1D3YZU1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shank1D3YZU1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shank1D3YZU1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank1D3YZU1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank1D3YZU1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank1D3YZU1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank1D3YZU1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank1D3YZU1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Shank1D3YZU1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Shank1D3YZU1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Shank1D3YZU1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.82■□□□□ 0.28
Shank1D3YZU1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank1D3YZU1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank1D3YZU1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shank1D3YZU1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Shank1D3YZU1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.81■□□□□ 0.28
Shank1D3YZU1 Gm6433-201ENSMUST00000118634 875 ntBASIC16.81■□□□□ 0.28
Shank1D3YZU1 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.81■□□□□ 0.28
Shank1D3YZU1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Shank1D3YZU1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shank1D3YZU1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shank1D3YZU1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.81■□□□□ 0.28
Shank1D3YZU1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shank1D3YZU1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shank1D3YZU1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Shank1D3YZU1 Gm18666-201ENSMUST00000190039 958 ntBASIC16.81■□□□□ 0.28
Shank1D3YZU1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shank1D3YZU1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Shank1D3YZU1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.81■□□□□ 0.28
Shank1D3YZU1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shank1D3YZU1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shank1D3YZU1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shank1D3YZU1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shank1D3YZU1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shank1D3YZU1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shank1D3YZU1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shank1D3YZU1 Gm10231-201ENSMUST00000181584 441 ntBASIC16.8■□□□□ 0.28
Shank1D3YZU1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shank1D3YZU1 Gm10175-202ENSMUST00000208752 441 ntBASIC16.8■□□□□ 0.28
Shank1D3YZU1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.8■□□□□ 0.28
Shank1D3YZU1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shank1D3YZU1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Shank1D3YZU1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shank1D3YZU1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shank1D3YZU1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shank1D3YZU1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.79■□□□□ 0.28
Shank1D3YZU1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shank1D3YZU1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Shank1D3YZU1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Shank1D3YZU1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Shank1D3YZU1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shank1D3YZU1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Shank1D3YZU1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.79■□□□□ 0.28
Shank1D3YZU1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shank1D3YZU1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shank1D3YZU1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Shank1D3YZU1 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.79■□□□□ 0.28
Shank1D3YZU1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.79■□□□□ 0.28
Shank1D3YZU1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shank1D3YZU1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shank1D3YZU1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shank1D3YZU1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Shank1D3YZU1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.78■□□□□ 0.28
Shank1D3YZU1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shank1D3YZU1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shank1D3YZU1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Shank1D3YZU1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shank1D3YZU1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Shank1D3YZU1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shank1D3YZU1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.78■□□□□ 0.28
Shank1D3YZU1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.78■□□□□ 0.28
Shank1D3YZU1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shank1D3YZU1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms