Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.67■□□□□ 0.74
Col4a6B1AVK5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a6B1AVK5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Col4a6B1AVK5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a6B1AVK5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a6B1AVK5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a6B1AVK5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Col4a6B1AVK5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a6B1AVK5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a6B1AVK5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.66■□□□□ 0.74
Col4a6B1AVK5 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.66■□□□□ 0.74
Col4a6B1AVK5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a6B1AVK5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a6B1AVK5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.66■□□□□ 0.74
Col4a6B1AVK5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a6B1AVK5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a6B1AVK5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a6B1AVK5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a6B1AVK5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a6B1AVK5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a6B1AVK5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Col4a6B1AVK5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Col4a6B1AVK5 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.65■□□□□ 0.74
Col4a6B1AVK5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a6B1AVK5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a6B1AVK5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col4a6B1AVK5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Col4a6B1AVK5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col4a6B1AVK5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col4a6B1AVK5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a6B1AVK5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a6B1AVK5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a6B1AVK5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col4a6B1AVK5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Col4a6B1AVK5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a6B1AVK5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a6B1AVK5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col4a6B1AVK5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a6B1AVK5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a6B1AVK5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.62■□□□□ 0.73
Col4a6B1AVK5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a6B1AVK5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a6B1AVK5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a6B1AVK5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a6B1AVK5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a6B1AVK5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Col4a6B1AVK5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.62■□□□□ 0.73
Col4a6B1AVK5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a6B1AVK5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a6B1AVK5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a6B1AVK5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col4a6B1AVK5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a6B1AVK5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.61■□□□□ 0.73
Col4a6B1AVK5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a6B1AVK5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a6B1AVK5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a6B1AVK5 Gm43799-201ENSMUST00000201845 579 ntBASIC19.6■□□□□ 0.73
Col4a6B1AVK5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.6■□□□□ 0.73
Col4a6B1AVK5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a6B1AVK5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a6B1AVK5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a6B1AVK5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a6B1AVK5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a6B1AVK5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a6B1AVK5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a6B1AVK5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a6B1AVK5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a6B1AVK5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a6B1AVK5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.59■□□□□ 0.73
Col4a6B1AVK5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a6B1AVK5 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.59■□□□□ 0.73
Col4a6B1AVK5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a6B1AVK5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a6B1AVK5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a6B1AVK5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Col4a6B1AVK5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a6B1AVK5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.59■□□□□ 0.73
Col4a6B1AVK5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a6B1AVK5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.59■□□□□ 0.73
Col4a6B1AVK5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a6B1AVK5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Col4a6B1AVK5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.58■□□□□ 0.73
Col4a6B1AVK5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a6B1AVK5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a6B1AVK5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a6B1AVK5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a6B1AVK5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a6B1AVK5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a6B1AVK5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a6B1AVK5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.58■□□□□ 0.72
Col4a6B1AVK5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a6B1AVK5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a6B1AVK5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Col4a6B1AVK5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a6B1AVK5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.57■□□□□ 0.72
Col4a6B1AVK5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a6B1AVK5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Col4a6B1AVK5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms