Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11127A7VMS2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11127A7VMS2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11127A7VMS2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.63■□□□□ 0.25
Gm11127A7VMS2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11127A7VMS2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11127A7VMS2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Gm11127A7VMS2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11127A7VMS2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11127A7VMS2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11127A7VMS2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11127A7VMS2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11127A7VMS2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11127A7VMS2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11127A7VMS2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Gm11127A7VMS2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11127A7VMS2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11127A7VMS2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Gm11127A7VMS2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Gm11127A7VMS2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Gm11127A7VMS2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11127A7VMS2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11127A7VMS2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm11127A7VMS2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm11127A7VMS2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm11127A7VMS2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm11127A7VMS2 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.61■□□□□ 0.25
Gm11127A7VMS2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Gm11127A7VMS2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.61■□□□□ 0.25
Gm11127A7VMS2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
Gm11127A7VMS2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm11127A7VMS2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm11127A7VMS2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.61■□□□□ 0.25
Gm11127A7VMS2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm11127A7VMS2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Gm11127A7VMS2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Gm11127A7VMS2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm11127A7VMS2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm11127A7VMS2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.6■□□□□ 0.25
Gm11127A7VMS2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.59■□□□□ 0.25
Gm11127A7VMS2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Gm11127A7VMS2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Gm11127A7VMS2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm11127A7VMS2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm11127A7VMS2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm11127A7VMS2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.59■□□□□ 0.25
Gm11127A7VMS2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.59■□□□□ 0.25
Gm11127A7VMS2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm11127A7VMS2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Gm11127A7VMS2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm11127A7VMS2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm11127A7VMS2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm11127A7VMS2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Gm11127A7VMS2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm11127A7VMS2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm11127A7VMS2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm11127A7VMS2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.58■□□□□ 0.24
Gm11127A7VMS2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm11127A7VMS2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm11127A7VMS2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm11127A7VMS2 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.58■□□□□ 0.24
Gm11127A7VMS2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm11127A7VMS2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm11127A7VMS2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm11127A7VMS2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm11127A7VMS2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
Gm11127A7VMS2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.57■□□□□ 0.24
Gm11127A7VMS2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm11127A7VMS2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Gm11127A7VMS2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm11127A7VMS2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.57■□□□□ 0.24
Gm11127A7VMS2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
Gm11127A7VMS2 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.57■□□□□ 0.24
Gm11127A7VMS2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.57■□□□□ 0.24
Gm11127A7VMS2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm11127A7VMS2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Gm11127A7VMS2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm11127A7VMS2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm11127A7VMS2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm11127A7VMS2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm11127A7VMS2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Gm11127A7VMS2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Gm11127A7VMS2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms