Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn1aA2APX8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn1aA2APX8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn1aA2APX8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn1aA2APX8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn1aA2APX8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Scn1aA2APX8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Scn1aA2APX8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.85■□□□□ 0.77
Scn1aA2APX8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Scn1aA2APX8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.85■□□□□ 0.77
Scn1aA2APX8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn1aA2APX8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn1aA2APX8 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.84■□□□□ 0.77
Scn1aA2APX8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn1aA2APX8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn1aA2APX8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn1aA2APX8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn1aA2APX8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn1aA2APX8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn1aA2APX8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Scn1aA2APX8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Scn1aA2APX8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Scn1aA2APX8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.83■□□□□ 0.77
Scn1aA2APX8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn1aA2APX8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn1aA2APX8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn1aA2APX8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn1aA2APX8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn1aA2APX8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Scn1aA2APX8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn1aA2APX8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn1aA2APX8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn1aA2APX8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn1aA2APX8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.82■□□□□ 0.76
Scn1aA2APX8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn1aA2APX8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.82■□□□□ 0.76
Scn1aA2APX8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.82■□□□□ 0.76
Scn1aA2APX8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn1aA2APX8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn1aA2APX8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn1aA2APX8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn1aA2APX8 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.81■□□□□ 0.76
Scn1aA2APX8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1aA2APX8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1aA2APX8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1aA2APX8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1aA2APX8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1aA2APX8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1aA2APX8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1aA2APX8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1aA2APX8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1aA2APX8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1aA2APX8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1aA2APX8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1aA2APX8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1aA2APX8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1aA2APX8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn1aA2APX8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn1aA2APX8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn1aA2APX8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Scn1aA2APX8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn1aA2APX8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Scn1aA2APX8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn1aA2APX8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn1aA2APX8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn1aA2APX8 Gm12527-201ENSMUST00000117967 564 ntBASIC19.79■□□□□ 0.76
Scn1aA2APX8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn1aA2APX8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn1aA2APX8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn1aA2APX8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Scn1aA2APX8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Scn1aA2APX8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn1aA2APX8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms