Protein–RNA interactions for Protein: A1L3C8

Gm5089, EG328479 protein, mousemouse

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5089A1L3C8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm5089A1L3C8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Gm5089A1L3C8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm5089A1L3C8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5089A1L3C8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5089A1L3C8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5089A1L3C8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5089A1L3C8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.12■□□□□ 0.01
Gm5089A1L3C8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5089A1L3C8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.12■□□□□ 0.01
Gm5089A1L3C8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5089A1L3C8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5089A1L3C8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm5089A1L3C8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.12■□□□□ 0.01
Gm5089A1L3C8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5089A1L3C8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm5089A1L3C8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5089A1L3C8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5089A1L3C8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5089A1L3C8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5089A1L3C8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5089A1L3C8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5089A1L3C8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5089A1L3C8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5089A1L3C8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 Dio3-201ENSMUST00000097228 1449 ntBASIC15.1■□□□□ 0.01
Gm5089A1L3C8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5089A1L3C8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5089A1L3C8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm5089A1L3C8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm5089A1L3C8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm5089A1L3C8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm5089A1L3C8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm5089A1L3C8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm5089A1L3C8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.08■□□□□ 0
Gm5089A1L3C8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Gm5089A1L3C8 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.08■□□□□ 0
Gm5089A1L3C8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm5089A1L3C8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Gm5089A1L3C8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm5089A1L3C8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm5089A1L3C8 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.08■□□□□ 0
Gm5089A1L3C8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Gm5089A1L3C8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Gm5089A1L3C8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm5089A1L3C8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm5089A1L3C8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.07■□□□□ 0
Gm5089A1L3C8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm5089A1L3C8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm5089A1L3C8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm5089A1L3C8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.07■□□□□ 0
Gm5089A1L3C8 Gm715-201ENSMUST00000117865 831 ntBASIC15.07■□□□□ 0
Gm5089A1L3C8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.07■□□□□ 0
Gm5089A1L3C8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.07■□□□□ 0
Gm5089A1L3C8 Gm18666-201ENSMUST00000190039 958 ntBASIC15.07■□□□□ 0
Gm5089A1L3C8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Gm5089A1L3C8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm5089A1L3C8 Gm44549-201ENSMUST00000208351 577 ntBASIC15.07■□□□□ 0
Gm5089A1L3C8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.07■□□□□ 0
Gm5089A1L3C8 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.07■□□□□ 0
Gm5089A1L3C8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm5089A1L3C8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm5089A1L3C8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm5089A1L3C8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Gm5089A1L3C8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm5089A1L3C8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm5089A1L3C8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm5089A1L3C8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm5089A1L3C8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm5089A1L3C8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm5089A1L3C8 Gm11249-201ENSMUST00000117071 859 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms