Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.47■□□□□ 0.39
IsxA1A546 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
IsxA1A546 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IsxA1A546 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IsxA1A546 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IsxA1A546 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
IsxA1A546 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IsxA1A546 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IsxA1A546 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IsxA1A546 Gm14117-201ENSMUST00000122417 843 ntBASIC17.47■□□□□ 0.39
IsxA1A546 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.47■□□□□ 0.39
IsxA1A546 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
IsxA1A546 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
IsxA1A546 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
IsxA1A546 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.47■□□□□ 0.39
IsxA1A546 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IsxA1A546 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.47■□□□□ 0.39
IsxA1A546 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IsxA1A546 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IsxA1A546 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IsxA1A546 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IsxA1A546 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IsxA1A546 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IsxA1A546 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
IsxA1A546 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.46■□□□□ 0.39
IsxA1A546 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IsxA1A546 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
IsxA1A546 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IsxA1A546 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IsxA1A546 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IsxA1A546 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IsxA1A546 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IsxA1A546 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IsxA1A546 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.45■□□□□ 0.38
IsxA1A546 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.45■□□□□ 0.38
IsxA1A546 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IsxA1A546 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IsxA1A546 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.45■□□□□ 0.38
IsxA1A546 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IsxA1A546 Gm9959-201ENSMUST00000068277 390 ntBASIC17.45■□□□□ 0.38
IsxA1A546 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
IsxA1A546 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IsxA1A546 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
IsxA1A546 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IsxA1A546 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
IsxA1A546 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IsxA1A546 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IsxA1A546 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IsxA1A546 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IsxA1A546 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.44■□□□□ 0.38
IsxA1A546 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.44■□□□□ 0.38
IsxA1A546 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IsxA1A546 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IsxA1A546 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IsxA1A546 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.44■□□□□ 0.38
IsxA1A546 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.44■□□□□ 0.38
IsxA1A546 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IsxA1A546 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IsxA1A546 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
IsxA1A546 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
IsxA1A546 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IsxA1A546 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.44■□□□□ 0.38
IsxA1A546 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
IsxA1A546 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
IsxA1A546 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IsxA1A546 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
IsxA1A546 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
IsxA1A546 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IsxA1A546 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.42■□□□□ 0.38
IsxA1A546 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
IsxA1A546 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IsxA1A546 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
IsxA1A546 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IsxA1A546 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IsxA1A546 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IsxA1A546 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IsxA1A546 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IsxA1A546 Etf1-202ENSMUST00000180351 108 ntBASIC17.42■□□□□ 0.38
IsxA1A546 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IsxA1A546 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
IsxA1A546 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IsxA1A546 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IsxA1A546 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IsxA1A546 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IsxA1A546 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms