Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv17A0A140T8P8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv17A0A140T8P8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.4□□□□□ -0.1
Trbv17A0A140T8P8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv17A0A140T8P8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv17A0A140T8P8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv17A0A140T8P8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv17A0A140T8P8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv17A0A140T8P8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv17A0A140T8P8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Gm27801-201ENSMUST00000184174 223 ntBASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv17A0A140T8P8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trbv17A0A140T8P8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv17A0A140T8P8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.37□□□□□ -0.11
Trbv17A0A140T8P8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trbv17A0A140T8P8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv17A0A140T8P8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv17A0A140T8P8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv17A0A140T8P8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trbv17A0A140T8P8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv17A0A140T8P8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv17A0A140T8P8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv17A0A140T8P8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.37□□□□□ -0.11
Trbv17A0A140T8P8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv17A0A140T8P8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.37□□□□□ -0.11
Trbv17A0A140T8P8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv17A0A140T8P8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv17A0A140T8P8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Gm9988-201ENSMUST00000069786 435 ntBASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv17A0A140T8P8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms