Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.7■□□□□ 0.42
1700028J19RikA0A0U1RP08 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
1700028J19RikA0A0U1RP08 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
1700028J19RikA0A0U1RP08 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
1700028J19RikA0A0U1RP08 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
1700028J19RikA0A0U1RP08 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
1700028J19RikA0A0U1RP08 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
1700028J19RikA0A0U1RP08 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.7■□□□□ 0.42
1700028J19RikA0A0U1RP08 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
1700028J19RikA0A0U1RP08 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
1700028J19RikA0A0U1RP08 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.7■□□□□ 0.42
1700028J19RikA0A0U1RP08 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
1700028J19RikA0A0U1RP08 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
1700028J19RikA0A0U1RP08 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
1700028J19RikA0A0U1RP08 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
1700028J19RikA0A0U1RP08 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
1700028J19RikA0A0U1RP08 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.69■□□□□ 0.42
1700028J19RikA0A0U1RP08 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
1700028J19RikA0A0U1RP08 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
1700028J19RikA0A0U1RP08 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
1700028J19RikA0A0U1RP08 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
1700028J19RikA0A0U1RP08 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
1700028J19RikA0A0U1RP08 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
1700028J19RikA0A0U1RP08 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
1700028J19RikA0A0U1RP08 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
1700028J19RikA0A0U1RP08 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
1700028J19RikA0A0U1RP08 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
1700028J19RikA0A0U1RP08 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
1700028J19RikA0A0U1RP08 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
1700028J19RikA0A0U1RP08 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.68■□□□□ 0.42
1700028J19RikA0A0U1RP08 Gm43060-201ENSMUST00000200621 289 ntBASIC17.68■□□□□ 0.42
1700028J19RikA0A0U1RP08 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
1700028J19RikA0A0U1RP08 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
1700028J19RikA0A0U1RP08 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
1700028J19RikA0A0U1RP08 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
1700028J19RikA0A0U1RP08 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
1700028J19RikA0A0U1RP08 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
1700028J19RikA0A0U1RP08 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
1700028J19RikA0A0U1RP08 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.67■□□□□ 0.42
1700028J19RikA0A0U1RP08 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.67■□□□□ 0.42
1700028J19RikA0A0U1RP08 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
1700028J19RikA0A0U1RP08 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
1700028J19RikA0A0U1RP08 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
1700028J19RikA0A0U1RP08 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
1700028J19RikA0A0U1RP08 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
1700028J19RikA0A0U1RP08 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
1700028J19RikA0A0U1RP08 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
1700028J19RikA0A0U1RP08 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
1700028J19RikA0A0U1RP08 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
1700028J19RikA0A0U1RP08 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
1700028J19RikA0A0U1RP08 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
1700028J19RikA0A0U1RP08 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.66■□□□□ 0.42
1700028J19RikA0A0U1RP08 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.66■□□□□ 0.42
1700028J19RikA0A0U1RP08 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
1700028J19RikA0A0U1RP08 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
1700028J19RikA0A0U1RP08 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
1700028J19RikA0A0U1RP08 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
1700028J19RikA0A0U1RP08 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
1700028J19RikA0A0U1RP08 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
1700028J19RikA0A0U1RP08 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.63■□□□□ 0.41
1700028J19RikA0A0U1RP08 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
1700028J19RikA0A0U1RP08 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
1700028J19RikA0A0U1RP08 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms