Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.46■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.46■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.46■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.46■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12821-201ENSMUST00000120022 600 ntBASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.43■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms