Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav9d-4A0A0G2JG37 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav9d-4A0A0G2JG37 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 BC021767-201ENSMUST00000126387 1716 ntBASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9d-4A0A0G2JG37 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Gm13238-201ENSMUST00000117655 780 ntBASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Gm45640-201ENSMUST00000210665 1896 ntBASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9d-4A0A0G2JG37 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9d-4A0A0G2JG37 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 AA386476-201ENSMUST00000098781 1665 ntBASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9d-4A0A0G2JG37 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms