Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav9n-2A0A0G2JDP3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9n-2A0A0G2JDP3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.67□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Gm43060-201ENSMUST00000200621 289 ntBASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-2A0A0G2JDP3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms