Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Gm5540-201ENSMUST00000131852 1848 ntBASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Gm7417-201ENSMUST00000192950 473 ntBASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Gm37352-201ENSMUST00000193908 2181 ntBASIC12.93□□□□□ -0.34
Trav11A0A0B4J1J9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav11A0A0B4J1J9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav11A0A0B4J1J9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav11A0A0B4J1J9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms