Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv20A0A0B4J1H5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv20A0A0B4J1H5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv20A0A0B4J1H5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv20A0A0B4J1H5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv20A0A0B4J1H5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trbv20A0A0B4J1H5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv20A0A0B4J1H5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv20A0A0B4J1H5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv20A0A0B4J1H5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv20A0A0B4J1H5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv20A0A0B4J1H5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.87■□□□□ 0.29
Trbv20A0A0B4J1H5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv20A0A0B4J1H5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trbv20A0A0B4J1H5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv20A0A0B4J1H5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv20A0A0B4J1H5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv20A0A0B4J1H5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv20A0A0B4J1H5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trbv20A0A0B4J1H5 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.87■□□□□ 0.29
Trbv20A0A0B4J1H5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv20A0A0B4J1H5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv20A0A0B4J1H5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv20A0A0B4J1H5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv20A0A0B4J1H5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv20A0A0B4J1H5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv20A0A0B4J1H5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv20A0A0B4J1H5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv20A0A0B4J1H5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trbv20A0A0B4J1H5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trbv20A0A0B4J1H5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Trbv20A0A0B4J1H5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv20A0A0B4J1H5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv20A0A0B4J1H5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trbv20A0A0B4J1H5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv20A0A0B4J1H5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv20A0A0B4J1H5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv20A0A0B4J1H5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.85■□□□□ 0.29
Trbv20A0A0B4J1H5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv20A0A0B4J1H5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Trbv20A0A0B4J1H5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.85■□□□□ 0.29
Trbv20A0A0B4J1H5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv20A0A0B4J1H5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv20A0A0B4J1H5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv20A0A0B4J1H5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv20A0A0B4J1H5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv20A0A0B4J1H5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv20A0A0B4J1H5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv20A0A0B4J1H5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trbv20A0A0B4J1H5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.84■□□□□ 0.29
Trbv20A0A0B4J1H5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv20A0A0B4J1H5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.84■□□□□ 0.29
Trbv20A0A0B4J1H5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv20A0A0B4J1H5 Gm5921-201ENSMUST00000075898 882 ntBASIC16.84■□□□□ 0.29
Trbv20A0A0B4J1H5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv20A0A0B4J1H5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv20A0A0B4J1H5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv20A0A0B4J1H5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Trbv20A0A0B4J1H5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trbv20A0A0B4J1H5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv20A0A0B4J1H5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trbv20A0A0B4J1H5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trbv20A0A0B4J1H5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trbv20A0A0B4J1H5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv20A0A0B4J1H5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv20A0A0B4J1H5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv20A0A0B4J1H5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
Trbv20A0A0B4J1H5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv20A0A0B4J1H5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.83■□□□□ 0.28
Trbv20A0A0B4J1H5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv20A0A0B4J1H5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv20A0A0B4J1H5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv20A0A0B4J1H5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv20A0A0B4J1H5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv20A0A0B4J1H5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv20A0A0B4J1H5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv20A0A0B4J1H5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv20A0A0B4J1H5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv20A0A0B4J1H5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv20A0A0B4J1H5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv20A0A0B4J1H5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv20A0A0B4J1H5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.82■□□□□ 0.28
Trbv20A0A0B4J1H5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trbv20A0A0B4J1H5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trbv20A0A0B4J1H5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv20A0A0B4J1H5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Trbv20A0A0B4J1H5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv20A0A0B4J1H5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv20A0A0B4J1H5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv20A0A0B4J1H5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv20A0A0B4J1H5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv20A0A0B4J1H5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv20A0A0B4J1H5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trbv20A0A0B4J1H5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv20A0A0B4J1H5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv20A0A0B4J1H5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv20A0A0B4J1H5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv20A0A0B4J1H5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv20A0A0B4J1H5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv20A0A0B4J1H5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms