Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-2A0A0B4J1H1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.87□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.87□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-2A0A0B4J1H1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-2A0A0B4J1H1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.87□□□□□ -0.03
Trbv12-2A0A0B4J1H1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.87□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.86□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.85□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.85□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv12-2A0A0B4J1H1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms