Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-47A0A0A6YY41 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-47A0A0A6YY41 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-47A0A0A6YY41 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-47A0A0A6YY41 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-47A0A0A6YY41 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-47A0A0A6YY41 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-47A0A0A6YY41 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ighv1-47A0A0A6YY41 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-47A0A0A6YY41 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Ighv1-47A0A0A6YY41 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ighv1-47A0A0A6YY41 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-47A0A0A6YY41 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-47A0A0A6YY41 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-47A0A0A6YY41 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-47A0A0A6YY41 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-47A0A0A6YY41 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-47A0A0A6YY41 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-47A0A0A6YY41 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-47A0A0A6YY41 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-47A0A0A6YY41 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.49■□□□□ 0.07
Ighv1-47A0A0A6YY41 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Gm26833-201ENSMUST00000180899 440 ntBASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-47A0A0A6YY41 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-47A0A0A6YY41 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-47A0A0A6YY41 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ighv1-47A0A0A6YY41 Gm43017-201ENSMUST00000198296 752 ntBASIC15.47■□□□□ 0.07
Ighv1-47A0A0A6YY41 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-47A0A0A6YY41 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-47A0A0A6YY41 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-47A0A0A6YY41 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-47A0A0A6YY41 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-47A0A0A6YY41 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-47A0A0A6YY41 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-47A0A0A6YY41 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-47A0A0A6YY41 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms