Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28778A0A087WSK7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28778A0A087WSK7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.28■□□□□ 0.04
Gm28778A0A087WSK7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28778A0A087WSK7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28778A0A087WSK7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28778A0A087WSK7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28778A0A087WSK7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28778A0A087WSK7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.27■□□□□ 0.03
Gm28778A0A087WSK7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Gm28778A0A087WSK7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28778A0A087WSK7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28778A0A087WSK7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28778A0A087WSK7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28778A0A087WSK7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28778A0A087WSK7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.25■□□□□ 0.03
Gm28778A0A087WSK7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Gm28778A0A087WSK7 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.25■□□□□ 0.03
Gm28778A0A087WSK7 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.25■□□□□ 0.03
Gm28778A0A087WSK7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28778A0A087WSK7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28778A0A087WSK7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28778A0A087WSK7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28778A0A087WSK7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Gm28778A0A087WSK7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 BC021767-201ENSMUST00000126387 1716 ntBASIC15.23■□□□□ 0.03
Gm28778A0A087WSK7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Gm6420-201ENSMUST00000193885 723 ntBASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms