Protein–RNA interactions for Protein: A0A087WP44

Gm28897, Predicted gene 28827, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28897A0A087WP44 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28897A0A087WP44 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28897A0A087WP44 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28897A0A087WP44 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28897A0A087WP44 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28897A0A087WP44 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Gm28897A0A087WP44 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
Gm28897A0A087WP44 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Gm28897A0A087WP44 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Gm28897A0A087WP44 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
Gm28897A0A087WP44 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Gm28897A0A087WP44 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28897A0A087WP44 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28897A0A087WP44 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28897A0A087WP44 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Gm9870-201ENSMUST00000063874 645 ntBASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 BC021767-201ENSMUST00000126387 1716 ntBASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Gm28897A0A087WP44 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28897A0A087WP44 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28897A0A087WP44 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28897A0A087WP44 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28897A0A087WP44 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28897A0A087WP44 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28897A0A087WP44 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28897A0A087WP44 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28897A0A087WP44 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28897A0A087WP44 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28897A0A087WP44 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28897A0A087WP44 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28897A0A087WP44 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Gm28897A0A087WP44 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28897A0A087WP44 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms