Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Gm12366-201ENSMUST00000121722 873 ntBASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Gm5786-201ENSMUST00000085368 882 ntBASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-5A0A075B6B5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav6-5A0A075B6B5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-5A0A075B6B5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-5A0A075B6B5 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.58□□□□□ -0.07
Trav6-5A0A075B6B5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.07
Trav6-5A0A075B6B5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-5A0A075B6B5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-5A0A075B6B5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-5A0A075B6B5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-5A0A075B6B5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav6-5A0A075B6B5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-5A0A075B6B5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-5A0A075B6B5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-5A0A075B6B5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-5A0A075B6B5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-5A0A075B6B5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav6-5A0A075B6B5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-5A0A075B6B5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-5A0A075B6B5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Trav6-5A0A075B6B5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-5A0A075B6B5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
Trav6-5A0A075B6B5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 Gm9870-201ENSMUST00000063874 645 ntBASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-5A0A075B6B5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-5A0A075B6B5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-5A0A075B6B5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-5A0A075B6B5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-5A0A075B6B5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-5A0A075B6B5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6-5A0A075B6B5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-5A0A075B6B5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-5A0A075B6B5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-5A0A075B6B5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-5A0A075B6B5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-5A0A075B6B5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-5A0A075B6B5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav6-5A0A075B6B5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav6-5A0A075B6B5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-5A0A075B6B5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-5A0A075B6B5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-5A0A075B6B5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Trav6-5A0A075B6B5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-5A0A075B6B5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-5A0A075B6B5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-5A0A075B6B5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-5A0A075B6B5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-5A0A075B6B5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-5A0A075B6B5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 140.5 ms