Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-3A0A075B6A4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-3A0A075B6A4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-3A0A075B6A4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-3A0A075B6A4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Gm6311-201ENSMUST00000073790 878 ntBASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav12d-3A0A075B6A4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.06□□□□□ -0.16
Trav12d-3A0A075B6A4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Gm7143-201ENSMUST00000222811 859 ntBASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-3A0A075B6A4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Trav12d-3A0A075B6A4 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.03□□□□□ -0.16
Trav12d-3A0A075B6A4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-3A0A075B6A4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-3A0A075B6A4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-3A0A075B6A4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-3A0A075B6A4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav12d-3A0A075B6A4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-3A0A075B6A4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav12d-3A0A075B6A4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-3A0A075B6A4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav12d-3A0A075B6A4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-3A0A075B6A4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-3A0A075B6A4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-3A0A075B6A4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-3A0A075B6A4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms