Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 AC167019.3-201ENSMUST00000228225 1266 ntBASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav3-4A0A075B654 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-4A0A075B654 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-4A0A075B654 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-4A0A075B654 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms