Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav14n-3A0A075B645 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.24□□□□□ -0.13
Trav14n-3A0A075B645 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav14n-3A0A075B645 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav14n-3A0A075B645 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav14n-3A0A075B645 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Gm45444-201ENSMUST00000211394 898 ntBASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav14n-3A0A075B645 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Gm12366-201ENSMUST00000121722 873 ntBASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Gm5786-201ENSMUST00000085368 882 ntBASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav14n-3A0A075B645 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav14n-3A0A075B645 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav14n-3A0A075B645 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav14n-3A0A075B645 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trav14n-3A0A075B645 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav14n-3A0A075B645 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms