Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8-1A0A075B641 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.5□□□□□ -0.25
Trav8-1A0A075B641 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8-1A0A075B641 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8-1A0A075B641 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8-1A0A075B641 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8-1A0A075B641 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8-1A0A075B641 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8-1A0A075B641 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trav8-1A0A075B641 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav8-1A0A075B641 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8-1A0A075B641 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8-1A0A075B641 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8-1A0A075B641 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8-1A0A075B641 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Trav8-1A0A075B641 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.47□□□□□ -0.25
Trav8-1A0A075B641 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8-1A0A075B641 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav8-1A0A075B641 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8-1A0A075B641 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav8-1A0A075B641 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms