Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.01■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.01■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.98■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.96■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.95■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms