Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4n-4A0A075B615 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4n-4A0A075B615 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 Gm8503-201ENSMUST00000118131 455 ntBASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4n-4A0A075B615 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4n-4A0A075B615 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav4n-4A0A075B615 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trav4n-4A0A075B615 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4n-4A0A075B615 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav4n-4A0A075B615 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4n-4A0A075B615 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav4n-4A0A075B615 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trav4n-4A0A075B615 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4n-4A0A075B615 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav4n-4A0A075B615 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4n-4A0A075B615 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav4n-4A0A075B615 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms