Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.01□□□□□ -0.17
Trav6-6A0A075B603 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.01□□□□□ -0.17
Trav6-6A0A075B603 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-6A0A075B603 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-6A0A075B603 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-6A0A075B603 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-6A0A075B603 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-6A0A075B603 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-6A0A075B603 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-6A0A075B603 Gm42922-201ENSMUST00000195887 2078 ntBASIC14□□□□□ -0.17
Trav6-6A0A075B603 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav6-6A0A075B603 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-6A0A075B603 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-6A0A075B603 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-6A0A075B603 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-6A0A075B603 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-6A0A075B603 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-6A0A075B603 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav6-6A0A075B603 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-6A0A075B603 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-6A0A075B603 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-6A0A075B603 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Rps24-207ENSMUST00000224568 714 ntBASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-6A0A075B603 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-6A0A075B603 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-6A0A075B603 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-6A0A075B603 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-6A0A075B603 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-6A0A075B603 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-6A0A075B603 Gm45102-201ENSMUST00000207427 857 ntBASIC13.96□□□□□ -0.17
Trav6-6A0A075B603 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-6A0A075B603 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-6A0A075B603 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.96□□□□□ -0.17
Trav6-6A0A075B603 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-6A0A075B603 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trav6-6A0A075B603 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-6A0A075B603 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-6A0A075B603 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-6A0A075B603 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trav6-6A0A075B603 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-6A0A075B603 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms