Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm45280-201ENSMUST00000210484 2552 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Zfp940-201ENSMUST00000085792 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Gm43221-201ENSMUST00000197612 2071 ntBASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Snx31-201ENSMUST00000013755 2696 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup88Q8CEC0 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nup88Q8CEC0 Fbxl2-201ENSMUST00000035090 3464 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nup88Q8CEC0 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Nup88Q8CEC0 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nup88Q8CEC0 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nup88Q8CEC0 Gm19445-201ENSMUST00000193649 2438 ntBASIC9.77□□□□□ -0.84
Nup88Q8CEC0 Gm45294-201ENSMUST00000210685 2102 ntBASIC9.77□□□□□ -0.84
Nup88Q8CEC0 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nup88Q8CEC0 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Hdhd2-207ENSMUST00000147332 1705 ntTSL 5 BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Ctnna3-201ENSMUST00000075099 2688 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm12075-201ENSMUST00000117426 397 ntBASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm11220-201ENSMUST00000118844 475 ntBASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm13323-201ENSMUST00000120245 1151 ntBASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm14911-201ENSMUST00000120803 989 ntBASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm14200-201ENSMUST00000122256 192 ntBASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Dcpp2-202ENSMUST00000168272 589 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm37822-201ENSMUST00000192618 1109 ntBASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm38188-201ENSMUST00000192879 856 ntBASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Igkv8-22-201ENSMUST00000199501 367 ntBASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm45475-201ENSMUST00000209381 309 ntBASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm2788-205ENSMUST00000209849 933 ntTSL 5 BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 0610005C13Rik-211ENSMUST00000211530 402 ntTSL 3 BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm45824-201ENSMUST00000212236 1004 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 1700030E10Rik-201ENSMUST00000218164 721 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Lilrb4a-215ENSMUST00000220182 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 AC160930.2-201ENSMUST00000226608 303 ntBASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm10036-201ENSMUST00000079733 537 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm44745-201ENSMUST00000206563 2723 ntBASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 9930024M15Rik-201ENSMUST00000214902 2584 ntBASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm15283-201ENSMUST00000125308 1451 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 AC153526.3-201ENSMUST00000220145 2183 ntBASIC9.77□□□□□ -0.85
Nup88Q8CEC0 2610008E11Rik-201ENSMUST00000039271 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nup88Q8CEC0 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 1110008L16Rik-202ENSMUST00000183475 2204 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Rpusd1-201ENSMUST00000047273 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm17473-202ENSMUST00000228544 2071 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Dhcr7-207ENSMUST00000141916 2752 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Ighv5-6-201ENSMUST00000103446 353 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm13673-201ENSMUST00000122056 531 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm12864-201ENSMUST00000122207 1006 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm24063-201ENSMUST00000157491 105 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm26040-201ENSMUST00000158147 161 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm5977-201ENSMUST00000174304 573 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Zfp738-204ENSMUST00000175678 609 ntTSL 2 BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm24307-201ENSMUST00000178512 101 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm26974-202ENSMUST00000183263 930 ntTSL 2 BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm27150-201ENSMUST00000183441 1038 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm9531-202ENSMUST00000183511 775 ntBASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms