Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Cog4-202ENSMUST00000165867 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Vill-201ENSMUST00000051386 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Cyp19a1-201ENSMUST00000034811 2373 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Gm14264-201ENSMUST00000147141 1864 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim39Q9ESN2 Rtl4-202ENSMUST00000112843 3635 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Trim39Q9ESN2 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Trim39Q9ESN2 Mettl18-201ENSMUST00000045694 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Trim39Q9ESN2 Zfp740-203ENSMUST00000119800 3882 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm42572-201ENSMUST00000202292 3378 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Ugt1a6a-202ENSMUST00000113134 2297 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Fam228a-204ENSMUST00000222363 2284 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 4932438H23Rik-202ENSMUST00000114076 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 AC124581.3-201ENSMUST00000224270 1624 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Calcoco2-201ENSMUST00000068686 1621 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Mro-201ENSMUST00000119239 1772 ntAPPRIS P3 TSL 5 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Npnt-201ENSMUST00000042729 3601 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Duxbl1-203ENSMUST00000172667 2209 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gbp2-201ENSMUST00000165774 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm44986-201ENSMUST00000206292 2829 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm24432-201ENSMUST00000104075 126 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Fmnl1-203ENSMUST00000107027 3693 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 1700013D24Rik-201ENSMUST00000112537 535 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm11191-201ENSMUST00000117231 610 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm14044-201ENSMUST00000117531 447 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Coa4-202ENSMUST00000120454 742 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm6298-201ENSMUST00000122262 981 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 n-R5s154-201ENSMUST00000122513 108 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm22762-201ENSMUST00000157395 137 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Olfr721-ps1-201ENSMUST00000165291 975 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm26445-201ENSMUST00000177557 109 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 B020031M17Rik-202ENSMUST00000180768 925 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm5313-201ENSMUST00000182893 987 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm27169-201ENSMUST00000183344 746 ntTSL 3 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm37000-201ENSMUST00000193058 428 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm42983-201ENSMUST00000199879 815 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm44282-201ENSMUST00000203199 190 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Olfr721-ps1-202ENSMUST00000206688 1097 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm6593-201ENSMUST00000211165 1135 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 AC131187.2-201ENSMUST00000223936 994 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 AC118249.1-201ENSMUST00000224822 608 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 AC154747.1-201ENSMUST00000225265 239 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Nsa2-203ENSMUST00000225410 974 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 AC159205.1-201ENSMUST00000225513 1099 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Cldn1-201ENSMUST00000023154 3247 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Apex2-201ENSMUST00000026303 1884 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 1700012A03Rik-201ENSMUST00000031778 918 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Ccr8-201ENSMUST00000048777 1175 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm36325-201ENSMUST00000210487 2885 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm13719-201ENSMUST00000122018 2111 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Prr5l-209ENSMUST00000163762 4159 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Olfr1283-203ENSMUST00000216637 1689 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 AC138716.1-201ENSMUST00000226350 2959 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 AC107763.1-201ENSMUST00000226082 1365 ntBASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Panx3-201ENSMUST00000011262 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Stmn2-201ENSMUST00000029002 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim39Q9ESN2 Slfn5-202ENSMUST00000108157 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Asns-201ENSMUST00000031766 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Mefv-201ENSMUST00000023180 3126 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Gm16063-201ENSMUST00000156235 1701 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 A530021J07Rik-205ENSMUST00000208699 1717 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim39Q9ESN2 Mgam2-ps-203ENSMUST00000216691 1709 ntTSL 5 BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms