Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm37524-201ENSMUST00000192272 1692 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm17743-201ENSMUST00000198545 1675 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Ccdc33-203ENSMUST00000098682 3117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm37980-201ENSMUST00000194420 1910 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Nol12-203ENSMUST00000138880 3717 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm4279-201ENSMUST00000154314 2329 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Mapre2-201ENSMUST00000025127 4026 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 AC160118.1-201ENSMUST00000214497 2457 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Epn2-202ENSMUST00000108711 4287 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Mcm6-203ENSMUST00000190495 4355 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Mcm7-201ENSMUST00000000505 2962 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Ptafr-201ENSMUST00000070690 3637 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm37077-201ENSMUST00000195723 3691 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Sat1-202ENSMUST00000112551 896 ntTSL 2 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm13423-201ENSMUST00000117205 888 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm15661-201ENSMUST00000117390 556 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 H2afb2-201ENSMUST00000118616 348 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 A930019D19Rik-201ENSMUST00000135360 958 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 1810021B22Rik-205ENSMUST00000162579 544 ntTSL 2 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm5093-201ENSMUST00000166852 522 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm2877-201ENSMUST00000178248 1204 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm8324-201ENSMUST00000178911 1204 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm27155-201ENSMUST00000183716 898 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm27715-201ENSMUST00000184714 260 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm29240-201ENSMUST00000187248 286 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm18529-201ENSMUST00000193025 1257 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm43572-201ENSMUST00000196494 519 ntTSL 2 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm7631-201ENSMUST00000196935 1100 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm42438-201ENSMUST00000197832 974 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm43833-201ENSMUST00000198828 293 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm43708-201ENSMUST00000198857 961 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm20156-201ENSMUST00000200877 1276 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm44508-201ENSMUST00000206943 1157 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm39128-201ENSMUST00000208237 1094 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm45619-201ENSMUST00000210360 528 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 AC069561.2-201ENSMUST00000217596 420 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 AC156952.1-201ENSMUST00000220361 793 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm20288-201ENSMUST00000222078 180 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 AC187103.3-201ENSMUST00000225725 646 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 AC122937.2-201ENSMUST00000228258 1051 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm5507-201ENSMUST00000091897 1008 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm6300-201ENSMUST00000192393 1498 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm19173-201ENSMUST00000204494 1523 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Olfr120-202ENSMUST00000207771 1625 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Polr1e-201ENSMUST00000029999 1724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm12408-206ENSMUST00000211577 1983 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm37649-201ENSMUST00000192079 2232 ntBASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Olfr411-203ENSMUST00000214769 2545 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Erc2-210ENSMUST00000211145 2874 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Rpgr-203ENSMUST00000073392 2926 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Pex5l-201ENSMUST00000078226 3164 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Tnpo3-202ENSMUST00000115251 3989 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim39Q9ESN2 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Depdc5-201ENSMUST00000049780 3569 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Deup1-203ENSMUST00000115593 3019 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Nckap5-202ENSMUST00000094609 2965 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Foxn3-202ENSMUST00000085108 2611 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms