Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdfS4R2K0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdfS4R2K0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdfS4R2K0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdfS4R2K0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdfS4R2K0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdfS4R2K0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PdfS4R2K0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdfS4R2K0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdfS4R2K0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdfS4R2K0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdfS4R2K0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdfS4R2K0 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.44□□□□□ -0.1
PdfS4R2K0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PdfS4R2K0 Gm12922-201ENSMUST00000120626 809 ntBASIC14.44□□□□□ -0.1
PdfS4R2K0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PdfS4R2K0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdfS4R2K0 Gm13241-201ENSMUST00000094493 780 ntBASIC14.44□□□□□ -0.1
PdfS4R2K0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdfS4R2K0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdfS4R2K0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdfS4R2K0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdfS4R2K0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdfS4R2K0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdfS4R2K0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdfS4R2K0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdfS4R2K0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdfS4R2K0 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.43□□□□□ -0.1
PdfS4R2K0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.43□□□□□ -0.1
PdfS4R2K0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PdfS4R2K0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdfS4R2K0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdfS4R2K0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdfS4R2K0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
PdfS4R2K0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
PdfS4R2K0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.43□□□□□ -0.1
PdfS4R2K0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PdfS4R2K0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdfS4R2K0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdfS4R2K0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PdfS4R2K0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PdfS4R2K0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdfS4R2K0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdfS4R2K0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdfS4R2K0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdfS4R2K0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PdfS4R2K0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdfS4R2K0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdfS4R2K0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdfS4R2K0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdfS4R2K0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdfS4R2K0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdfS4R2K0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdfS4R2K0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdfS4R2K0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdfS4R2K0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdfS4R2K0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdfS4R2K0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PdfS4R2K0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PdfS4R2K0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PdfS4R2K0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PdfS4R2K0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PdfS4R2K0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdfS4R2K0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdfS4R2K0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.4□□□□□ -0.1
PdfS4R2K0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdfS4R2K0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdfS4R2K0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.4□□□□□ -0.1
PdfS4R2K0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.4□□□□□ -0.1
PdfS4R2K0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PdfS4R2K0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.4□□□□□ -0.1
PdfS4R2K0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdfS4R2K0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdfS4R2K0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdfS4R2K0 Gm9847-201ENSMUST00000052528 599 ntBASIC14.4□□□□□ -0.1
PdfS4R2K0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdfS4R2K0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdfS4R2K0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdfS4R2K0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdfS4R2K0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdfS4R2K0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdfS4R2K0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms