Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.8■□□□□ 0.6
Mrpl40Q9Z2Q5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.8■□□□□ 0.6
Mrpl40Q9Z2Q5 Gm10602-201ENSMUST00000098239 609 ntBASIC18.8■□□□□ 0.6
Mrpl40Q9Z2Q5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mrpl40Q9Z2Q5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mrpl40Q9Z2Q5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mrpl40Q9Z2Q5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mrpl40Q9Z2Q5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mrpl40Q9Z2Q5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl40Q9Z2Q5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl40Q9Z2Q5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Mrpl40Q9Z2Q5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl40Q9Z2Q5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl40Q9Z2Q5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl40Q9Z2Q5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.78■□□□□ 0.6
Mrpl40Q9Z2Q5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Mrpl40Q9Z2Q5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl40Q9Z2Q5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Mrpl40Q9Z2Q5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl40Q9Z2Q5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl40Q9Z2Q5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl40Q9Z2Q5 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.78■□□□□ 0.6
Mrpl40Q9Z2Q5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl40Q9Z2Q5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl40Q9Z2Q5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl40Q9Z2Q5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl40Q9Z2Q5 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.77■□□□□ 0.6
Mrpl40Q9Z2Q5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl40Q9Z2Q5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl40Q9Z2Q5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Mrpl40Q9Z2Q5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl40Q9Z2Q5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl40Q9Z2Q5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl40Q9Z2Q5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Mrpl40Q9Z2Q5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl40Q9Z2Q5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl40Q9Z2Q5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl40Q9Z2Q5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl40Q9Z2Q5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl40Q9Z2Q5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl40Q9Z2Q5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.76■□□□□ 0.59
Mrpl40Q9Z2Q5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Mrpl40Q9Z2Q5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl40Q9Z2Q5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.76■□□□□ 0.59
Mrpl40Q9Z2Q5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl40Q9Z2Q5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Mrpl40Q9Z2Q5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl40Q9Z2Q5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl40Q9Z2Q5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl40Q9Z2Q5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.75■□□□□ 0.59
Mrpl40Q9Z2Q5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl40Q9Z2Q5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl40Q9Z2Q5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.75■□□□□ 0.59
Mrpl40Q9Z2Q5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl40Q9Z2Q5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl40Q9Z2Q5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl40Q9Z2Q5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl40Q9Z2Q5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl40Q9Z2Q5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 Gm7514-201ENSMUST00000209475 934 ntBASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl40Q9Z2Q5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl40Q9Z2Q5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl40Q9Z2Q5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl40Q9Z2Q5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl40Q9Z2Q5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl40Q9Z2Q5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl40Q9Z2Q5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Mrpl40Q9Z2Q5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Mrpl40Q9Z2Q5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms