Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk1bQ9Z2C6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk1bQ9Z2C6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Upk1bQ9Z2C6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk1bQ9Z2C6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.52■□□□□ 0.4
Upk1bQ9Z2C6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Upk1bQ9Z2C6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.52■□□□□ 0.39
Upk1bQ9Z2C6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.52■□□□□ 0.39
Upk1bQ9Z2C6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
Upk1bQ9Z2C6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1bQ9Z2C6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1bQ9Z2C6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1bQ9Z2C6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Upk1bQ9Z2C6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1bQ9Z2C6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Upk1bQ9Z2C6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1bQ9Z2C6 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.51■□□□□ 0.39
Upk1bQ9Z2C6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1bQ9Z2C6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1bQ9Z2C6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1bQ9Z2C6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Upk1bQ9Z2C6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1bQ9Z2C6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
Upk1bQ9Z2C6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1bQ9Z2C6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk1bQ9Z2C6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk1bQ9Z2C6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk1bQ9Z2C6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk1bQ9Z2C6 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.5■□□□□ 0.39
Upk1bQ9Z2C6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk1bQ9Z2C6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk1bQ9Z2C6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Upk1bQ9Z2C6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Upk1bQ9Z2C6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk1bQ9Z2C6 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.5■□□□□ 0.39
Upk1bQ9Z2C6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.5■□□□□ 0.39
Upk1bQ9Z2C6 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.5■□□□□ 0.39
Upk1bQ9Z2C6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk1bQ9Z2C6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1bQ9Z2C6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1bQ9Z2C6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
Upk1bQ9Z2C6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1bQ9Z2C6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1bQ9Z2C6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1bQ9Z2C6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.49■□□□□ 0.39
Upk1bQ9Z2C6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1bQ9Z2C6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1bQ9Z2C6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.49■□□□□ 0.39
Upk1bQ9Z2C6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1bQ9Z2C6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1bQ9Z2C6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1bQ9Z2C6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1bQ9Z2C6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Upk1bQ9Z2C6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.48■□□□□ 0.39
Upk1bQ9Z2C6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Upk1bQ9Z2C6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1bQ9Z2C6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1bQ9Z2C6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1bQ9Z2C6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1bQ9Z2C6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Upk1bQ9Z2C6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1bQ9Z2C6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Upk1bQ9Z2C6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1bQ9Z2C6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1bQ9Z2C6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1bQ9Z2C6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1bQ9Z2C6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Upk1bQ9Z2C6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1bQ9Z2C6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1bQ9Z2C6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1bQ9Z2C6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1bQ9Z2C6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.47■□□□□ 0.39
Upk1bQ9Z2C6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1bQ9Z2C6 Gm15820-201ENSMUST00000201566 728 ntBASIC17.47■□□□□ 0.39
Upk1bQ9Z2C6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1bQ9Z2C6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1bQ9Z2C6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Upk1bQ9Z2C6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Upk1bQ9Z2C6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1bQ9Z2C6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1bQ9Z2C6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1bQ9Z2C6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Upk1bQ9Z2C6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1bQ9Z2C6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Upk1bQ9Z2C6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Upk1bQ9Z2C6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1bQ9Z2C6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1bQ9Z2C6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.46■□□□□ 0.39
Upk1bQ9Z2C6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Upk1bQ9Z2C6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.46■□□□□ 0.39
Upk1bQ9Z2C6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1bQ9Z2C6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1bQ9Z2C6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1bQ9Z2C6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1bQ9Z2C6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1bQ9Z2C6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1bQ9Z2C6 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.46■□□□□ 0.38
Upk1bQ9Z2C6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Upk1bQ9Z2C6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Upk1bQ9Z2C6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms