Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.18■□□□□ 0.5
Cldn9Q9Z0S7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn9Q9Z0S7 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.18■□□□□ 0.5
Cldn9Q9Z0S7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn9Q9Z0S7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn9Q9Z0S7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn9Q9Z0S7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn9Q9Z0S7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn9Q9Z0S7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn9Q9Z0S7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.17■□□□□ 0.5
Cldn9Q9Z0S7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn9Q9Z0S7 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.17■□□□□ 0.5
Cldn9Q9Z0S7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn9Q9Z0S7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn9Q9Z0S7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn9Q9Z0S7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cldn9Q9Z0S7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn9Q9Z0S7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cldn9Q9Z0S7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn9Q9Z0S7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn9Q9Z0S7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn9Q9Z0S7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn9Q9Z0S7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn9Q9Z0S7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cldn9Q9Z0S7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cldn9Q9Z0S7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn9Q9Z0S7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn9Q9Z0S7 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.14■□□□□ 0.49
Cldn9Q9Z0S7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.14■□□□□ 0.49
Cldn9Q9Z0S7 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.14■□□□□ 0.49
Cldn9Q9Z0S7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.14■□□□□ 0.49
Cldn9Q9Z0S7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn9Q9Z0S7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn9Q9Z0S7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cldn9Q9Z0S7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn9Q9Z0S7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn9Q9Z0S7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.13■□□□□ 0.49
Cldn9Q9Z0S7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn9Q9Z0S7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn9Q9Z0S7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cldn9Q9Z0S7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.13■□□□□ 0.49
Cldn9Q9Z0S7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn9Q9Z0S7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn9Q9Z0S7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn9Q9Z0S7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn9Q9Z0S7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms