Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Shroom3Q9QXN0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19■□□□□ 0.63
Shroom3Q9QXN0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shroom3Q9QXN0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Shroom3Q9QXN0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Shroom3Q9QXN0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Shroom3Q9QXN0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Shroom3Q9QXN0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Shroom3Q9QXN0 Golph3-205ENSMUST00000228671 2842 ntBASIC18.99■□□□□ 0.63
Shroom3Q9QXN0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shroom3Q9QXN0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shroom3Q9QXN0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shroom3Q9QXN0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.99■□□□□ 0.63
Shroom3Q9QXN0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Shroom3Q9QXN0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom3Q9QXN0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom3Q9QXN0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom3Q9QXN0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.98■□□□□ 0.63
Shroom3Q9QXN0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Shroom3Q9QXN0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom3Q9QXN0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom3Q9QXN0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom3Q9QXN0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom3Q9QXN0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom3Q9QXN0 Gm13148-201ENSMUST00000118892 745 ntBASIC18.97■□□□□ 0.63
Shroom3Q9QXN0 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.97■□□□□ 0.63
Shroom3Q9QXN0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom3Q9QXN0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Shroom3Q9QXN0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom3Q9QXN0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom3Q9QXN0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom3Q9QXN0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom3Q9QXN0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom3Q9QXN0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom3Q9QXN0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom3Q9QXN0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom3Q9QXN0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.97■□□□□ 0.63
Shroom3Q9QXN0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom3Q9QXN0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Shroom3Q9QXN0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom3Q9QXN0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom3Q9QXN0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom3Q9QXN0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom3Q9QXN0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom3Q9QXN0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Shroom3Q9QXN0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom3Q9QXN0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom3Q9QXN0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.95■□□□□ 0.62
Shroom3Q9QXN0 Gm7514-201ENSMUST00000209475 934 ntBASIC18.95■□□□□ 0.62
Shroom3Q9QXN0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom3Q9QXN0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom3Q9QXN0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom3Q9QXN0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom3Q9QXN0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom3Q9QXN0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Shroom3Q9QXN0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Shroom3Q9QXN0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom3Q9QXN0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom3Q9QXN0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom3Q9QXN0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom3Q9QXN0 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.94■□□□□ 0.62
Shroom3Q9QXN0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom3Q9QXN0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms