Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh5Q9QUM7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh5Q9QUM7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh5Q9QUM7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.16■□□□□ 0.66
Msh5Q9QUM7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Msh5Q9QUM7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.16■□□□□ 0.66
Msh5Q9QUM7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Msh5Q9QUM7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh5Q9QUM7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh5Q9QUM7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Msh5Q9QUM7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh5Q9QUM7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Msh5Q9QUM7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Smad6-203ENSMUST00000179458 273 ntBASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh5Q9QUM7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Msh5Q9QUM7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Msh5Q9QUM7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Msh5Q9QUM7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Msh5Q9QUM7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh5Q9QUM7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Msh5Q9QUM7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Msh5Q9QUM7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.14■□□□□ 0.65
Msh5Q9QUM7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh5Q9QUM7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Msh5Q9QUM7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh5Q9QUM7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh5Q9QUM7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Msh5Q9QUM7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.14■□□□□ 0.65
Msh5Q9QUM7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh5Q9QUM7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Msh5Q9QUM7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh5Q9QUM7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh5Q9QUM7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh5Q9QUM7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Msh5Q9QUM7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh5Q9QUM7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Msh5Q9QUM7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh5Q9QUM7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Msh5Q9QUM7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.13■□□□□ 0.65
Msh5Q9QUM7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Msh5Q9QUM7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh5Q9QUM7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh5Q9QUM7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh5Q9QUM7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Msh5Q9QUM7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh5Q9QUM7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Msh5Q9QUM7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Msh5Q9QUM7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh5Q9QUM7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh5Q9QUM7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh5Q9QUM7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh5Q9QUM7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh5Q9QUM7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Msh5Q9QUM7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh5Q9QUM7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh5Q9QUM7 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Msh5Q9QUM7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Msh5Q9QUM7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh5Q9QUM7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Msh5Q9QUM7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh5Q9QUM7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh5Q9QUM7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Msh5Q9QUM7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh5Q9QUM7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh5Q9QUM7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh5Q9QUM7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh5Q9QUM7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Msh5Q9QUM7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Msh5Q9QUM7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.11■□□□□ 0.65
Msh5Q9QUM7 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh5Q9QUM7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Msh5Q9QUM7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh5Q9QUM7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh5Q9QUM7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh5Q9QUM7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh5Q9QUM7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms