Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rfx5Q9JL61 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx5Q9JL61 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx5Q9JL61 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx5Q9JL61 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx5Q9JL61 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx5Q9JL61 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx5Q9JL61 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.03■□□□□ 0.8
Rfx5Q9JL61 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx5Q9JL61 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.03■□□□□ 0.8
Rfx5Q9JL61 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx5Q9JL61 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rfx5Q9JL61 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx5Q9JL61 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx5Q9JL61 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx5Q9JL61 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.02■□□□□ 0.8
Rfx5Q9JL61 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.02■□□□□ 0.8
Rfx5Q9JL61 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.02■□□□□ 0.8
Rfx5Q9JL61 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx5Q9JL61 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Rfx5Q9JL61 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rfx5Q9JL61 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rfx5Q9JL61 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.01■□□□□ 0.79
Rfx5Q9JL61 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.01■□□□□ 0.79
Rfx5Q9JL61 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx5Q9JL61 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx5Q9JL61 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx5Q9JL61 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx5Q9JL61 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx5Q9JL61 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx5Q9JL61 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx5Q9JL61 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx5Q9JL61 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Rfx5Q9JL61 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx5Q9JL61 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Rfx5Q9JL61 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rfx5Q9JL61 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20■□□□□ 0.79
Rfx5Q9JL61 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx5Q9JL61 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx5Q9JL61 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx5Q9JL61 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx5Q9JL61 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rfx5Q9JL61 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx5Q9JL61 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx5Q9JL61 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx5Q9JL61 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx5Q9JL61 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx5Q9JL61 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx5Q9JL61 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx5Q9JL61 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx5Q9JL61 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.99■□□□□ 0.79
Rfx5Q9JL61 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx5Q9JL61 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx5Q9JL61 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx5Q9JL61 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx5Q9JL61 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx5Q9JL61 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx5Q9JL61 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx5Q9JL61 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rfx5Q9JL61 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Rfx5Q9JL61 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx5Q9JL61 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.97■□□□□ 0.79
Rfx5Q9JL61 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx5Q9JL61 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Rfx5Q9JL61 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Rfx5Q9JL61 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx5Q9JL61 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx5Q9JL61 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms