Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm10232-201ENSMUST00000089221 720 ntBASIC18.14■□□□□ 0.49
Ube4bQ9ES00 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Ube4bQ9ES00 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube4bQ9ES00 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube4bQ9ES00 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube4bQ9ES00 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube4bQ9ES00 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Gm10399-202ENSMUST00000202768 748 ntBASIC18.13■□□□□ 0.49
Ube4bQ9ES00 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ube4bQ9ES00 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4bQ9ES00 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
Ube4bQ9ES00 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4bQ9ES00 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4bQ9ES00 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.11■□□□□ 0.49
Ube4bQ9ES00 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4bQ9ES00 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.11■□□□□ 0.49
Ube4bQ9ES00 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4bQ9ES00 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4bQ9ES00 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4bQ9ES00 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4bQ9ES00 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ube4bQ9ES00 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4bQ9ES00 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4bQ9ES00 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4bQ9ES00 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4bQ9ES00 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4bQ9ES00 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4bQ9ES00 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.1■□□□□ 0.49
Ube4bQ9ES00 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4bQ9ES00 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.1■□□□□ 0.49
Ube4bQ9ES00 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4bQ9ES00 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4bQ9ES00 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4bQ9ES00 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4bQ9ES00 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4bQ9ES00 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4bQ9ES00 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ube4bQ9ES00 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4bQ9ES00 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ube4bQ9ES00 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.09■□□□□ 0.49
Ube4bQ9ES00 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ube4bQ9ES00 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.09■□□□□ 0.49
Ube4bQ9ES00 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4bQ9ES00 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ube4bQ9ES00 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ube4bQ9ES00 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ube4bQ9ES00 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ube4bQ9ES00 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Ube4bQ9ES00 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ube4bQ9ES00 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ube4bQ9ES00 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Ube4bQ9ES00 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube4bQ9ES00 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.08■□□□□ 0.48
Ube4bQ9ES00 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ube4bQ9ES00 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube4bQ9ES00 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube4bQ9ES00 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube4bQ9ES00 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4bQ9ES00 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4bQ9ES00 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.07■□□□□ 0.48
Ube4bQ9ES00 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4bQ9ES00 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.07■□□□□ 0.48
Ube4bQ9ES00 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.07■□□□□ 0.48
Ube4bQ9ES00 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ube4bQ9ES00 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4bQ9ES00 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4bQ9ES00 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.06■□□□□ 0.48
Ube4bQ9ES00 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.06■□□□□ 0.48
Ube4bQ9ES00 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube4bQ9ES00 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ube4bQ9ES00 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms