Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp2aQ9DB34 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp2aQ9DB34 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.68■□□□□ 0.74
Chmp2aQ9DB34 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.68■□□□□ 0.74
Chmp2aQ9DB34 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Chmp2aQ9DB34 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp2aQ9DB34 Gm42569-201ENSMUST00000200539 472 ntBASIC19.68■□□□□ 0.74
Chmp2aQ9DB34 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp2aQ9DB34 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.68■□□□□ 0.74
Chmp2aQ9DB34 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp2aQ9DB34 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Chmp2aQ9DB34 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2aQ9DB34 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.66■□□□□ 0.74
Chmp2aQ9DB34 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp2aQ9DB34 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp2aQ9DB34 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp2aQ9DB34 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp2aQ9DB34 Gm10033-202ENSMUST00000211874 928 ntBASIC19.66■□□□□ 0.74
Chmp2aQ9DB34 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp2aQ9DB34 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp2aQ9DB34 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.66■□□□□ 0.74
Chmp2aQ9DB34 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp2aQ9DB34 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp2aQ9DB34 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp2aQ9DB34 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp2aQ9DB34 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp2aQ9DB34 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.65■□□□□ 0.74
Chmp2aQ9DB34 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp2aQ9DB34 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp2aQ9DB34 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp2aQ9DB34 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp2aQ9DB34 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp2aQ9DB34 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp2aQ9DB34 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Chmp2aQ9DB34 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Chmp2aQ9DB34 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp2aQ9DB34 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp2aQ9DB34 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Chmp2aQ9DB34 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Chmp2aQ9DB34 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Chmp2aQ9DB34 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Chmp2aQ9DB34 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2aQ9DB34 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Chmp2aQ9DB34 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2aQ9DB34 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2aQ9DB34 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2aQ9DB34 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2aQ9DB34 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.63■□□□□ 0.73
Chmp2aQ9DB34 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2aQ9DB34 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2aQ9DB34 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2aQ9DB34 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2aQ9DB34 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2aQ9DB34 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2aQ9DB34 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Chmp2aQ9DB34 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2aQ9DB34 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.62■□□□□ 0.73
Chmp2aQ9DB34 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.62■□□□□ 0.73
Chmp2aQ9DB34 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2aQ9DB34 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2aQ9DB34 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2aQ9DB34 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Chmp2aQ9DB34 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 AV356131-201ENSMUST00000206201 750 ntBASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Chmp2aQ9DB34 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2aQ9DB34 Iqck-206ENSMUST00000208658 2891 ntBASIC19.6■□□□□ 0.73
Chmp2aQ9DB34 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Chmp2aQ9DB34 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Chmp2aQ9DB34 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Chmp2aQ9DB34 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2aQ9DB34 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms