Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd1Q9D0E3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Lysmd1Q9D0E3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Lysmd1Q9D0E3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lysmd1Q9D0E3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lysmd1Q9D0E3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lysmd1Q9D0E3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lysmd1Q9D0E3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.45■□□□□ 0.86
Lysmd1Q9D0E3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lysmd1Q9D0E3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.45■□□□□ 0.86
Lysmd1Q9D0E3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lysmd1Q9D0E3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lysmd1Q9D0E3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd1Q9D0E3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd1Q9D0E3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd1Q9D0E3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd1Q9D0E3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd1Q9D0E3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
Lysmd1Q9D0E3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Lysmd1Q9D0E3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd1Q9D0E3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd1Q9D0E3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd1Q9D0E3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd1Q9D0E3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd1Q9D0E3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd1Q9D0E3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd1Q9D0E3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd1Q9D0E3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd1Q9D0E3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd1Q9D0E3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd1Q9D0E3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd1Q9D0E3 Gm7063-201ENSMUST00000186840 981 ntBASIC20.43■□□□□ 0.86
Lysmd1Q9D0E3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.43■□□□□ 0.86
Lysmd1Q9D0E3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd1Q9D0E3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Lysmd1Q9D0E3 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.43■□□□□ 0.86
Lysmd1Q9D0E3 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.43■□□□□ 0.86
Lysmd1Q9D0E3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd1Q9D0E3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Lysmd1Q9D0E3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.42■□□□□ 0.86
Lysmd1Q9D0E3 Gm18958-201ENSMUST00000174258 762 ntBASIC20.42■□□□□ 0.86
Lysmd1Q9D0E3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd1Q9D0E3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd1Q9D0E3 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.42■□□□□ 0.86
Lysmd1Q9D0E3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd1Q9D0E3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd1Q9D0E3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd1Q9D0E3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd1Q9D0E3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd1Q9D0E3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd1Q9D0E3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd1Q9D0E3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd1Q9D0E3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.41■□□□□ 0.86
Lysmd1Q9D0E3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd1Q9D0E3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.41■□□□□ 0.86
Lysmd1Q9D0E3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd1Q9D0E3 Gm37935-201ENSMUST00000192012 982 ntBASIC20.41■□□□□ 0.86
Lysmd1Q9D0E3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd1Q9D0E3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd1Q9D0E3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd1Q9D0E3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
Lysmd1Q9D0E3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd1Q9D0E3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Lysmd1Q9D0E3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd1Q9D0E3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Lysmd1Q9D0E3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd1Q9D0E3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd1Q9D0E3 Gm18025-201ENSMUST00000221733 862 ntBASIC20.4■□□□□ 0.86
Lysmd1Q9D0E3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd1Q9D0E3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd1Q9D0E3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Lysmd1Q9D0E3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.4■□□□□ 0.86
Lysmd1Q9D0E3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lysmd1Q9D0E3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lysmd1Q9D0E3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.39■□□□□ 0.85
Lysmd1Q9D0E3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lysmd1Q9D0E3 Mtag2-201ENSMUST00000058665 714 ntBASIC20.39■□□□□ 0.85
Lysmd1Q9D0E3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lysmd1Q9D0E3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lysmd1Q9D0E3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.39■□□□□ 0.85
Lysmd1Q9D0E3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Lysmd1Q9D0E3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lysmd1Q9D0E3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lysmd1Q9D0E3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Lysmd1Q9D0E3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.38■□□□□ 0.85
Lysmd1Q9D0E3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.38■□□□□ 0.85
Lysmd1Q9D0E3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.38■□□□□ 0.85
Lysmd1Q9D0E3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lysmd1Q9D0E3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lysmd1Q9D0E3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.37■□□□□ 0.85
Lysmd1Q9D0E3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.37■□□□□ 0.85
Lysmd1Q9D0E3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Lysmd1Q9D0E3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.37■□□□□ 0.85
Lysmd1Q9D0E3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lysmd1Q9D0E3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Lysmd1Q9D0E3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lysmd1Q9D0E3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.37■□□□□ 0.85
Lysmd1Q9D0E3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Lysmd1Q9D0E3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lysmd1Q9D0E3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms