Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thumpd2Q9CZB3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Thumpd2Q9CZB3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thumpd2Q9CZB3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Thumpd2Q9CZB3 Gm6139-201ENSMUST00000079261 882 ntBASIC19.78■□□□□ 0.76
Thumpd2Q9CZB3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thumpd2Q9CZB3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Thumpd2Q9CZB3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thumpd2Q9CZB3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Thumpd2Q9CZB3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thumpd2Q9CZB3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.77■□□□□ 0.76
Thumpd2Q9CZB3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd2Q9CZB3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd2Q9CZB3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd2Q9CZB3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd2Q9CZB3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd2Q9CZB3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Thumpd2Q9CZB3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd2Q9CZB3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.77■□□□□ 0.76
Thumpd2Q9CZB3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.77■□□□□ 0.76
Thumpd2Q9CZB3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.77■□□□□ 0.76
Thumpd2Q9CZB3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.77■□□□□ 0.76
Thumpd2Q9CZB3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
Thumpd2Q9CZB3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd2Q9CZB3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Thumpd2Q9CZB3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Thumpd2Q9CZB3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Thumpd2Q9CZB3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd2Q9CZB3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Thumpd2Q9CZB3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd2Q9CZB3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd2Q9CZB3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Thumpd2Q9CZB3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd2Q9CZB3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Thumpd2Q9CZB3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.75■□□□□ 0.75
Thumpd2Q9CZB3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd2Q9CZB3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd2Q9CZB3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Thumpd2Q9CZB3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.74■□□□□ 0.75
Thumpd2Q9CZB3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Thumpd2Q9CZB3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thumpd2Q9CZB3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Thumpd2Q9CZB3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Thumpd2Q9CZB3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Thumpd2Q9CZB3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thumpd2Q9CZB3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd2Q9CZB3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd2Q9CZB3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd2Q9CZB3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd2Q9CZB3 Gm43173-201ENSMUST00000202246 593 ntBASIC19.73■□□□□ 0.75
Thumpd2Q9CZB3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd2Q9CZB3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.73■□□□□ 0.75
Thumpd2Q9CZB3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd2Q9CZB3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Thumpd2Q9CZB3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Thumpd2Q9CZB3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd2Q9CZB3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd2Q9CZB3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.73■□□□□ 0.75
Thumpd2Q9CZB3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Thumpd2Q9CZB3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.71■□□□□ 0.75
Thumpd2Q9CZB3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd2Q9CZB3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd2Q9CZB3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd2Q9CZB3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd2Q9CZB3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Thumpd2Q9CZB3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Thumpd2Q9CZB3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd2Q9CZB3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms