Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q9CQC3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q9CQC3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Q9CQC3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q9CQC3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Q9CQC3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Q9CQC3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9CQC3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9CQC3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Q9CQC3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9CQC3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9CQC3 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.67■□□□□ 0.74
Q9CQC3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9CQC3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Q9CQC3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.67■□□□□ 0.74
Q9CQC3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.67■□□□□ 0.74
Q9CQC3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q9CQC3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.67■□□□□ 0.74
Q9CQC3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9CQC3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.67■□□□□ 0.74
Q9CQC3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.67■□□□□ 0.74
Q9CQC3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Q9CQC3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.66■□□□□ 0.74
Q9CQC3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9CQC3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9CQC3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9CQC3 Gm10493-201ENSMUST00000097270 612 ntBASIC19.66■□□□□ 0.74
Q9CQC3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.66■□□□□ 0.74
Q9CQC3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9CQC3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9CQC3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Q9CQC3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CQC3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CQC3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CQC3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CQC3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.65■□□□□ 0.74
Q9CQC3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CQC3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CQC3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Q9CQC3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CQC3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CQC3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CQC3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CQC3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CQC3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CQC3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CQC3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CQC3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.65■□□□□ 0.74
Q9CQC3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Q9CQC3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Q9CQC3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Q9CQC3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Q9CQC3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q9CQC3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Q9CQC3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.64■□□□□ 0.73
Q9CQC3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.64■□□□□ 0.73
Q9CQC3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Q9CQC3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.64■□□□□ 0.73
Q9CQC3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
Q9CQC3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q9CQC3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q9CQC3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q9CQC3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CQC3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CQC3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CQC3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CQC3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CQC3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CQC3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CQC3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CQC3 Gm13234-201ENSMUST00000120010 747 ntBASIC19.63■□□□□ 0.73
Q9CQC3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CQC3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.63■□□□□ 0.73
Q9CQC3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CQC3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CQC3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CQC3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CQC3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CQC3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CQC3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CQC3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CQC3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CQC3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Q9CQC3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CQC3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CQC3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.62■□□□□ 0.73
Q9CQC3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CQC3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CQC3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CQC3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CQC3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CQC3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9CQC3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9CQC3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9CQC3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9CQC3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Q9CQC3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.61■□□□□ 0.73
Q9CQC3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9CQC3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9CQC3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms