Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Rpa3Q9CQ71 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa3Q9CQ71 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa3Q9CQ71 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa3Q9CQ71 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa3Q9CQ71 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa3Q9CQ71 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa3Q9CQ71 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.93■□□□□ 0.78
Rpa3Q9CQ71 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rpa3Q9CQ71 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa3Q9CQ71 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa3Q9CQ71 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa3Q9CQ71 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa3Q9CQ71 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rpa3Q9CQ71 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa3Q9CQ71 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Rpa3Q9CQ71 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa3Q9CQ71 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.92■□□□□ 0.78
Rpa3Q9CQ71 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.92■□□□□ 0.78
Rpa3Q9CQ71 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa3Q9CQ71 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
Rpa3Q9CQ71 Gm5874-201ENSMUST00000096101 508 ntBASIC19.92■□□□□ 0.78
Rpa3Q9CQ71 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa3Q9CQ71 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa3Q9CQ71 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Rpa3Q9CQ71 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rpa3Q9CQ71 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa3Q9CQ71 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa3Q9CQ71 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa3Q9CQ71 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.92■□□□□ 0.78
Rpa3Q9CQ71 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa3Q9CQ71 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa3Q9CQ71 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa3Q9CQ71 Gm13234-201ENSMUST00000120010 747 ntBASIC19.91■□□□□ 0.78
Rpa3Q9CQ71 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa3Q9CQ71 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa3Q9CQ71 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa3Q9CQ71 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rpa3Q9CQ71 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa3Q9CQ71 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rpa3Q9CQ71 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa3Q9CQ71 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa3Q9CQ71 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.91■□□□□ 0.78
Rpa3Q9CQ71 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rpa3Q9CQ71 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.91■□□□□ 0.78
Rpa3Q9CQ71 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rpa3Q9CQ71 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa3Q9CQ71 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.9■□□□□ 0.78
Rpa3Q9CQ71 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa3Q9CQ71 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.9■□□□□ 0.78
Rpa3Q9CQ71 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa3Q9CQ71 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rpa3Q9CQ71 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rpa3Q9CQ71 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.89■□□□□ 0.77
Rpa3Q9CQ71 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpa3Q9CQ71 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rpa3Q9CQ71 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Rpa3Q9CQ71 Gm18284-201ENSMUST00000172604 624 ntBASIC19.89■□□□□ 0.77
Rpa3Q9CQ71 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpa3Q9CQ71 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.89■□□□□ 0.77
Rpa3Q9CQ71 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.89■□□□□ 0.77
Rpa3Q9CQ71 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpa3Q9CQ71 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpa3Q9CQ71 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rpa3Q9CQ71 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpa3Q9CQ71 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rpa3Q9CQ71 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa3Q9CQ71 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.88■□□□□ 0.77
Rpa3Q9CQ71 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa3Q9CQ71 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa3Q9CQ71 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa3Q9CQ71 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rpa3Q9CQ71 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa3Q9CQ71 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa3Q9CQ71 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa3Q9CQ71 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa3Q9CQ71 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa3Q9CQ71 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa3Q9CQ71 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rpa3Q9CQ71 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpa3Q9CQ71 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpa3Q9CQ71 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpa3Q9CQ71 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rpa3Q9CQ71 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rpa3Q9CQ71 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rpa3Q9CQ71 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpa3Q9CQ71 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa3Q9CQ71 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa3Q9CQ71 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa3Q9CQ71 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.86■□□□□ 0.77
Rpa3Q9CQ71 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.86■□□□□ 0.77
Rpa3Q9CQ71 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.86■□□□□ 0.77
Rpa3Q9CQ71 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa3Q9CQ71 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa3Q9CQ71 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa3Q9CQ71 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa3Q9CQ71 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa3Q9CQ71 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa3Q9CQ71 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa3Q9CQ71 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms