Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.32■□□□□ 0.52
Rnf111Q99ML9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf111Q99ML9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf111Q99ML9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf111Q99ML9 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.32■□□□□ 0.52
Rnf111Q99ML9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf111Q99ML9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf111Q99ML9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf111Q99ML9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf111Q99ML9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.31■□□□□ 0.52
Rnf111Q99ML9 Gm8493-201ENSMUST00000196881 489 ntBASIC18.31■□□□□ 0.52
Rnf111Q99ML9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.31■□□□□ 0.52
Rnf111Q99ML9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
Rnf111Q99ML9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf111Q99ML9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf111Q99ML9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf111Q99ML9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf111Q99ML9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf111Q99ML9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.3■□□□□ 0.52
Rnf111Q99ML9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf111Q99ML9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rnf111Q99ML9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf111Q99ML9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf111Q99ML9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf111Q99ML9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf111Q99ML9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.29■□□□□ 0.52
Rnf111Q99ML9 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.29■□□□□ 0.52
Rnf111Q99ML9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf111Q99ML9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rnf111Q99ML9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf111Q99ML9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf111Q99ML9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf111Q99ML9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf111Q99ML9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf111Q99ML9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf111Q99ML9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rnf111Q99ML9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf111Q99ML9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf111Q99ML9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf111Q99ML9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf111Q99ML9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.27■□□□□ 0.52
Rnf111Q99ML9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.27■□□□□ 0.52
Rnf111Q99ML9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf111Q99ML9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf111Q99ML9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf111Q99ML9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf111Q99ML9 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.27■□□□□ 0.51
Rnf111Q99ML9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.27■□□□□ 0.51
Rnf111Q99ML9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf111Q99ML9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf111Q99ML9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf111Q99ML9 Gm43173-201ENSMUST00000202246 593 ntBASIC18.26■□□□□ 0.51
Rnf111Q99ML9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf111Q99ML9 Gm6139-201ENSMUST00000079261 882 ntBASIC18.26■□□□□ 0.51
Rnf111Q99ML9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Rnf111Q99ML9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf111Q99ML9 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.25■□□□□ 0.51
Rnf111Q99ML9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rnf111Q99ML9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf111Q99ML9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf111Q99ML9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.25■□□□□ 0.51
Rnf111Q99ML9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rnf111Q99ML9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf111Q99ML9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf111Q99ML9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf111Q99ML9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf111Q99ML9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms