Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Lysmd3Q99LE3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Mir5133-201ENSMUST00000174955 77 ntBASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd3Q99LE3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lysmd3Q99LE3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.58■□□□□ 0.73
Lysmd3Q99LE3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
Lysmd3Q99LE3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lysmd3Q99LE3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lysmd3Q99LE3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lysmd3Q99LE3 Gm6365-201ENSMUST00000054711 744 ntBASIC19.58■□□□□ 0.72
Lysmd3Q99LE3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lysmd3Q99LE3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lysmd3Q99LE3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lysmd3Q99LE3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lysmd3Q99LE3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lysmd3Q99LE3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lysmd3Q99LE3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Lysmd3Q99LE3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.57■□□□□ 0.72
Lysmd3Q99LE3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lysmd3Q99LE3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.57■□□□□ 0.72
Lysmd3Q99LE3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lysmd3Q99LE3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lysmd3Q99LE3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Lysmd3Q99LE3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lysmd3Q99LE3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lysmd3Q99LE3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd3Q99LE3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd3Q99LE3 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.56■□□□□ 0.72
Lysmd3Q99LE3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd3Q99LE3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd3Q99LE3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd3Q99LE3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd3Q99LE3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Lysmd3Q99LE3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd3Q99LE3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd3Q99LE3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Lysmd3Q99LE3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lysmd3Q99LE3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd3Q99LE3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd3Q99LE3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd3Q99LE3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd3Q99LE3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd3Q99LE3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Lysmd3Q99LE3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.55■□□□□ 0.72
Lysmd3Q99LE3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd3Q99LE3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Lysmd3Q99LE3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd3Q99LE3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd3Q99LE3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd3Q99LE3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd3Q99LE3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lysmd3Q99LE3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lysmd3Q99LE3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lysmd3Q99LE3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lysmd3Q99LE3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lysmd3Q99LE3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Lysmd3Q99LE3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.54■□□□□ 0.72
Lysmd3Q99LE3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.54■□□□□ 0.72
Lysmd3Q99LE3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lysmd3Q99LE3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lysmd3Q99LE3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lysmd3Q99LE3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lysmd3Q99LE3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Lysmd3Q99LE3 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.53■□□□□ 0.72
Lysmd3Q99LE3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lysmd3Q99LE3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lysmd3Q99LE3 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.53■□□□□ 0.72
Lysmd3Q99LE3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.53■□□□□ 0.72
Lysmd3Q99LE3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lysmd3Q99LE3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.53■□□□□ 0.72
Lysmd3Q99LE3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lysmd3Q99LE3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Lysmd3Q99LE3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lysmd3Q99LE3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lysmd3Q99LE3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Lysmd3Q99LE3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lysmd3Q99LE3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lysmd3Q99LE3 Gm7290-201ENSMUST00000104990 617 ntBASIC19.52■□□□□ 0.72
Lysmd3Q99LE3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.52■□□□□ 0.72
Lysmd3Q99LE3 Gm12918-201ENSMUST00000120234 636 ntBASIC19.52■□□□□ 0.72
Lysmd3Q99LE3 Gm15710-201ENSMUST00000121821 636 ntBASIC19.52■□□□□ 0.72
Lysmd3Q99LE3 Gm5075-201ENSMUST00000196916 622 ntBASIC19.52■□□□□ 0.72
Lysmd3Q99LE3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms