Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm7977-201ENSMUST00000193787 748 ntBASIC21.85■■□□□ 1.09
Rfc4Q99J62 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.85■■□□□ 1.09
Rfc4Q99J62 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rfc4Q99J62 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
Rfc4Q99J62 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
Rfc4Q99J62 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rfc4Q99J62 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rfc4Q99J62 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rfc4Q99J62 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
Rfc4Q99J62 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rfc4Q99J62 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rfc4Q99J62 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rfc4Q99J62 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rfc4Q99J62 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rfc4Q99J62 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rfc4Q99J62 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rfc4Q99J62 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rfc4Q99J62 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Rfc4Q99J62 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rfc4Q99J62 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.83■■□□□ 1.09
Rfc4Q99J62 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rfc4Q99J62 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rfc4Q99J62 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rfc4Q99J62 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rfc4Q99J62 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Rfc4Q99J62 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rfc4Q99J62 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rfc4Q99J62 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rfc4Q99J62 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.82■■□□□ 1.08
Rfc4Q99J62 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.82■■□□□ 1.08
Rfc4Q99J62 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rfc4Q99J62 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Rfc4Q99J62 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.81■■□□□ 1.08
Rfc4Q99J62 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.81■■□□□ 1.08
Rfc4Q99J62 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rfc4Q99J62 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rfc4Q99J62 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rfc4Q99J62 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rfc4Q99J62 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rfc4Q99J62 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rfc4Q99J62 Dio3-201ENSMUST00000097228 1449 ntBASIC21.8■■□□□ 1.08
Rfc4Q99J62 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rfc4Q99J62 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.8■■□□□ 1.08
Rfc4Q99J62 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rfc4Q99J62 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Rfc4Q99J62 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.8■■□□□ 1.08
Rfc4Q99J62 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rfc4Q99J62 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rfc4Q99J62 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rfc4Q99J62 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfc4Q99J62 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfc4Q99J62 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfc4Q99J62 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfc4Q99J62 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rfc4Q99J62 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.79■■□□□ 1.08
Rfc4Q99J62 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfc4Q99J62 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfc4Q99J62 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rfc4Q99J62 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rfc4Q99J62 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfc4Q99J62 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rfc4Q99J62 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rfc4Q99J62 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rfc4Q99J62 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rfc4Q99J62 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rfc4Q99J62 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Rfc4Q99J62 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rfc4Q99J62 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rfc4Q99J62 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rfc4Q99J62 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Rfc4Q99J62 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rfc4Q99J62 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Rfc4Q99J62 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rfc4Q99J62 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.76■■□□□ 1.07
Rfc4Q99J62 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rfc4Q99J62 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rfc4Q99J62 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Rfc4Q99J62 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.76■■□□□ 1.07
Rfc4Q99J62 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.76■■□□□ 1.07
Rfc4Q99J62 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Rfc4Q99J62 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rfc4Q99J62 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rfc4Q99J62 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rfc4Q99J62 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rfc4Q99J62 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Rfc4Q99J62 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rfc4Q99J62 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.76■■□□□ 1.07
Rfc4Q99J62 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rfc4Q99J62 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rfc4Q99J62 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfc4Q99J62 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfc4Q99J62 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfc4Q99J62 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfc4Q99J62 Gm13836-201ENSMUST00000121159 501 ntBASIC21.75■■□□□ 1.07
Rfc4Q99J62 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfc4Q99J62 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfc4Q99J62 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfc4Q99J62 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Rfc4Q99J62 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfc4Q99J62 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms