Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prdm9Q96EQ9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.6■□□□□ 0.57
Prdm9Q96EQ9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prdm9Q96EQ9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prdm9Q96EQ9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prdm9Q96EQ9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prdm9Q96EQ9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prdm9Q96EQ9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Prdm9Q96EQ9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prdm9Q96EQ9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prdm9Q96EQ9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prdm9Q96EQ9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prdm9Q96EQ9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Gm6211-202ENSMUST00000167849 925 ntBASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prdm9Q96EQ9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prdm9Q96EQ9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prdm9Q96EQ9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prdm9Q96EQ9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prdm9Q96EQ9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Prdm9Q96EQ9 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.58■□□□□ 0.56
Prdm9Q96EQ9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.58■□□□□ 0.56
Prdm9Q96EQ9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prdm9Q96EQ9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prdm9Q96EQ9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Prdm9Q96EQ9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prdm9Q96EQ9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prdm9Q96EQ9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prdm9Q96EQ9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prdm9Q96EQ9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.57■□□□□ 0.56
Prdm9Q96EQ9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prdm9Q96EQ9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.57■□□□□ 0.56
Prdm9Q96EQ9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prdm9Q96EQ9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prdm9Q96EQ9 Golph3-202ENSMUST00000226517 2359 ntBASIC18.57■□□□□ 0.56
Prdm9Q96EQ9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Prdm9Q96EQ9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prdm9Q96EQ9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prdm9Q96EQ9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.56■□□□□ 0.56
Prdm9Q96EQ9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prdm9Q96EQ9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prdm9Q96EQ9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Prdm9Q96EQ9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Prdm9Q96EQ9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prdm9Q96EQ9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Prdm9Q96EQ9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Prdm9Q96EQ9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prdm9Q96EQ9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prdm9Q96EQ9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prdm9Q96EQ9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prdm9Q96EQ9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prdm9Q96EQ9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Gm4968-201ENSMUST00000071458 858 ntBASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms