Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pcdha11Q91Y19 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.85■□□□□ 0.77
Pcdha11Q91Y19 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Pcdha11Q91Y19 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha11Q91Y19 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pcdha11Q91Y19 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pcdha11Q91Y19 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdha11Q91Y19 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha11Q91Y19 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha11Q91Y19 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.84■□□□□ 0.77
Pcdha11Q91Y19 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.84■□□□□ 0.77
Pcdha11Q91Y19 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha11Q91Y19 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha11Q91Y19 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha11Q91Y19 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.84■□□□□ 0.77
Pcdha11Q91Y19 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha11Q91Y19 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha11Q91Y19 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha11Q91Y19 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha11Q91Y19 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha11Q91Y19 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Pcdha11Q91Y19 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha11Q91Y19 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Pcdha11Q91Y19 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha11Q91Y19 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha11Q91Y19 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha11Q91Y19 Gm12933-201ENSMUST00000120203 872 ntBASIC19.83■□□□□ 0.77
Pcdha11Q91Y19 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Pcdha11Q91Y19 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdha11Q91Y19 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Pcdha11Q91Y19 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdha11Q91Y19 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha11Q91Y19 Golph3-202ENSMUST00000226517 2359 ntBASIC19.82■□□□□ 0.76
Pcdha11Q91Y19 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Pcdha11Q91Y19 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.82■□□□□ 0.76
Pcdha11Q91Y19 Gm10602-201ENSMUST00000098239 609 ntBASIC19.82■□□□□ 0.76
Pcdha11Q91Y19 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha11Q91Y19 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Pcdha11Q91Y19 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha11Q91Y19 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha11Q91Y19 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.81■□□□□ 0.76
Pcdha11Q91Y19 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha11Q91Y19 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha11Q91Y19 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha11Q91Y19 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha11Q91Y19 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdha11Q91Y19 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.8■□□□□ 0.76
Pcdha11Q91Y19 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha11Q91Y19 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha11Q91Y19 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdha11Q91Y19 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha11Q91Y19 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdha11Q91Y19 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdha11Q91Y19 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdha11Q91Y19 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha11Q91Y19 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha11Q91Y19 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha11Q91Y19 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha11Q91Y19 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha11Q91Y19 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha11Q91Y19 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pcdha11Q91Y19 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdha11Q91Y19 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha11Q91Y19 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha11Q91Y19 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha11Q91Y19 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha11Q91Y19 Mir5133-201ENSMUST00000174955 77 ntBASIC19.78■□□□□ 0.76
Pcdha11Q91Y19 Gm6365-201ENSMUST00000054711 744 ntBASIC19.78■□□□□ 0.76
Pcdha11Q91Y19 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha11Q91Y19 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha11Q91Y19 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pcdha11Q91Y19 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha11Q91Y19 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha11Q91Y19 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha11Q91Y19 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha11Q91Y19 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.77■□□□□ 0.76
Pcdha11Q91Y19 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha11Q91Y19 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.77■□□□□ 0.76
Pcdha11Q91Y19 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha11Q91Y19 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha11Q91Y19 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha11Q91Y19 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha11Q91Y19 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha11Q91Y19 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pcdha11Q91Y19 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms