Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha3Q91Y16 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha3Q91Y16 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha3Q91Y16 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha3Q91Y16 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.73■□□□□ 0.75
Pcdha3Q91Y16 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Pcdha3Q91Y16 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha3Q91Y16 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha3Q91Y16 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Pcdha3Q91Y16 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha3Q91Y16 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha3Q91Y16 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha3Q91Y16 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha3Q91Y16 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.72■□□□□ 0.75
Pcdha3Q91Y16 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha3Q91Y16 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdha3Q91Y16 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha3Q91Y16 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha3Q91Y16 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha3Q91Y16 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha3Q91Y16 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha3Q91Y16 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Pcdha3Q91Y16 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha3Q91Y16 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha3Q91Y16 Gm13234-201ENSMUST00000120010 747 ntBASIC19.71■□□□□ 0.75
Pcdha3Q91Y16 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha3Q91Y16 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdha3Q91Y16 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdha3Q91Y16 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdha3Q91Y16 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha3Q91Y16 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha3Q91Y16 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha3Q91Y16 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha3Q91Y16 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha3Q91Y16 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha3Q91Y16 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha3Q91Y16 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha3Q91Y16 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdha3Q91Y16 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pcdha3Q91Y16 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Pcdha3Q91Y16 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
Pcdha3Q91Y16 Gm10033-202ENSMUST00000211874 928 ntBASIC19.7■□□□□ 0.74
Pcdha3Q91Y16 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha3Q91Y16 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha3Q91Y16 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdha3Q91Y16 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha3Q91Y16 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdha3Q91Y16 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha3Q91Y16 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Pcdha3Q91Y16 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha3Q91Y16 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha3Q91Y16 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha3Q91Y16 Gm42569-201ENSMUST00000200539 472 ntBASIC19.69■□□□□ 0.74
Pcdha3Q91Y16 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha3Q91Y16 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha3Q91Y16 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Pcdha3Q91Y16 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha3Q91Y16 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha3Q91Y16 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 Reep4-203ENSMUST00000226563 1444 ntBASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdha3Q91Y16 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha3Q91Y16 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdha3Q91Y16 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha3Q91Y16 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdha3Q91Y16 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdha3Q91Y16 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.67■□□□□ 0.74
Pcdha3Q91Y16 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha3Q91Y16 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdha3Q91Y16 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha3Q91Y16 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha3Q91Y16 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha3Q91Y16 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdha3Q91Y16 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha3Q91Y16 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdha3Q91Y16 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha3Q91Y16 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.66■□□□□ 0.74
Pcdha3Q91Y16 Gm10849-201ENSMUST00000100397 618 ntBASIC19.66■□□□□ 0.74
Pcdha3Q91Y16 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha3Q91Y16 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha3Q91Y16 AV356131-201ENSMUST00000206201 750 ntBASIC19.66■□□□□ 0.74
Pcdha3Q91Y16 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha3Q91Y16 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdha3Q91Y16 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha3Q91Y16 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdha3Q91Y16 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha3Q91Y16 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms