Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb5Q91XZ5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb5Q91XZ5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb5Q91XZ5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb5Q91XZ5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb5Q91XZ5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb5Q91XZ5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb5Q91XZ5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb5Q91XZ5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC22.36■■□□□ 1.17
Pcdhb5Q91XZ5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb5Q91XZ5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcdhb5Q91XZ5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb5Q91XZ5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC22.36■■□□□ 1.17
Pcdhb5Q91XZ5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb5Q91XZ5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb5Q91XZ5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb5Q91XZ5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb5Q91XZ5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Pcdhb5Q91XZ5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb5Q91XZ5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Pcdhb5Q91XZ5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Pcdhb5Q91XZ5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb5Q91XZ5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb5Q91XZ5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC22.34■■□□□ 1.17
Pcdhb5Q91XZ5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Pcdhb5Q91XZ5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb5Q91XZ5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb5Q91XZ5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb5Q91XZ5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb5Q91XZ5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Pcdhb5Q91XZ5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC22.34■■□□□ 1.17
Pcdhb5Q91XZ5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC22.34■■□□□ 1.17
Pcdhb5Q91XZ5 Gm2559-201ENSMUST00000201323 363 ntBASIC22.34■■□□□ 1.17
Pcdhb5Q91XZ5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb5Q91XZ5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb5Q91XZ5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb5Q91XZ5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Pcdhb5Q91XZ5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb5Q91XZ5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb5Q91XZ5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.33■■□□□ 1.17
Pcdhb5Q91XZ5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb5Q91XZ5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC22.33■■□□□ 1.17
Pcdhb5Q91XZ5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Pcdhb5Q91XZ5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb5Q91XZ5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb5Q91XZ5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb5Q91XZ5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb5Q91XZ5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb5Q91XZ5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhb5Q91XZ5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhb5Q91XZ5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb5Q91XZ5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC22.32■■□□□ 1.16
Pcdhb5Q91XZ5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Pcdhb5Q91XZ5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb5Q91XZ5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Pcdhb5Q91XZ5 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb5Q91XZ5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC22.32■■□□□ 1.16
Pcdhb5Q91XZ5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC22.32■■□□□ 1.16
Pcdhb5Q91XZ5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb5Q91XZ5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb5Q91XZ5 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.32■■□□□ 1.16
Pcdhb5Q91XZ5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb5Q91XZ5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb5Q91XZ5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb5Q91XZ5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb5Q91XZ5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb5Q91XZ5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb5Q91XZ5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb5Q91XZ5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb5Q91XZ5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb5Q91XZ5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb5Q91XZ5 Gm19094-201ENSMUST00000209791 1246 ntBASIC22.3■■□□□ 1.16
Pcdhb5Q91XZ5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
Pcdhb5Q91XZ5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb5Q91XZ5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb5Q91XZ5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb5Q91XZ5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb5Q91XZ5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC22.29■■□□□ 1.16
Pcdhb5Q91XZ5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb5Q91XZ5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.29■■□□□ 1.16
Pcdhb5Q91XZ5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb5Q91XZ5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb5Q91XZ5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb5Q91XZ5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb5Q91XZ5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb5Q91XZ5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
Pcdhb5Q91XZ5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb5Q91XZ5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Pcdhb5Q91XZ5 Dio3-201ENSMUST00000097228 1449 ntBASIC22.28■■□□□ 1.16
Pcdhb5Q91XZ5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb5Q91XZ5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb5Q91XZ5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Pcdhb5Q91XZ5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb5Q91XZ5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb5Q91XZ5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.27■■□□□ 1.16
Pcdhb5Q91XZ5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb5Q91XZ5 Gm44549-201ENSMUST00000208351 577 ntBASIC22.27■■□□□ 1.16
Pcdhb5Q91XZ5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC22.27■■□□□ 1.16
Pcdhb5Q91XZ5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb5Q91XZ5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms