Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga6Q91XY2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga6Q91XY2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga6Q91XY2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga6Q91XY2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhga6Q91XY2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga6Q91XY2 Gm13534-201ENSMUST00000121169 513 ntBASIC18.69■□□□□ 0.58
Pcdhga6Q91XY2 Gm26524-201ENSMUST00000192339 390 ntBASIC18.69■□□□□ 0.58
Pcdhga6Q91XY2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.69■□□□□ 0.58
Pcdhga6Q91XY2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Pcdhga6Q91XY2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga6Q91XY2 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.69■□□□□ 0.58
Pcdhga6Q91XY2 Rab3c-203ENSMUST00000224180 967 ntBASIC18.69■□□□□ 0.58
Pcdhga6Q91XY2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga6Q91XY2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga6Q91XY2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga6Q91XY2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga6Q91XY2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga6Q91XY2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga6Q91XY2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga6Q91XY2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhga6Q91XY2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdhga6Q91XY2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga6Q91XY2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga6Q91XY2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga6Q91XY2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhga6Q91XY2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga6Q91XY2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga6Q91XY2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhga6Q91XY2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Pcdhga6Q91XY2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga6Q91XY2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga6Q91XY2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga6Q91XY2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga6Q91XY2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga6Q91XY2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga6Q91XY2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga6Q91XY2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.66■□□□□ 0.58
Pcdhga6Q91XY2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhga6Q91XY2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga6Q91XY2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga6Q91XY2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga6Q91XY2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhga6Q91XY2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga6Q91XY2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga6Q91XY2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga6Q91XY2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga6Q91XY2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga6Q91XY2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhga6Q91XY2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhga6Q91XY2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhga6Q91XY2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhga6Q91XY2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga6Q91XY2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhga6Q91XY2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.64■□□□□ 0.57
Pcdhga6Q91XY2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga6Q91XY2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga6Q91XY2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdhga6Q91XY2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga6Q91XY2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga6Q91XY2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga6Q91XY2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga6Q91XY2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga6Q91XY2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga6Q91XY2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga6Q91XY2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga6Q91XY2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga6Q91XY2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga6Q91XY2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga6Q91XY2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga6Q91XY2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga6Q91XY2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhga6Q91XY2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga6Q91XY2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.63■□□□□ 0.57
Pcdhga6Q91XY2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga6Q91XY2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga6Q91XY2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga6Q91XY2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga6Q91XY2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhga6Q91XY2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga6Q91XY2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga6Q91XY2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga6Q91XY2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga6Q91XY2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms