Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TraipQ8VIG6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TraipQ8VIG6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TraipQ8VIG6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.15■□□□□ 0.82
TraipQ8VIG6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TraipQ8VIG6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TraipQ8VIG6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TraipQ8VIG6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TraipQ8VIG6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TraipQ8VIG6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TraipQ8VIG6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TraipQ8VIG6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TraipQ8VIG6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
TraipQ8VIG6 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.14■□□□□ 0.82
TraipQ8VIG6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TraipQ8VIG6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TraipQ8VIG6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TraipQ8VIG6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TraipQ8VIG6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TraipQ8VIG6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TraipQ8VIG6 Gm8520-201ENSMUST00000186517 868 ntBASIC20.14■□□□□ 0.81
TraipQ8VIG6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.14■□□□□ 0.81
TraipQ8VIG6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.14■□□□□ 0.81
TraipQ8VIG6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TraipQ8VIG6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TraipQ8VIG6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TraipQ8VIG6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.14■□□□□ 0.81
TraipQ8VIG6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TraipQ8VIG6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TraipQ8VIG6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TraipQ8VIG6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.14■□□□□ 0.81
TraipQ8VIG6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TraipQ8VIG6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TraipQ8VIG6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TraipQ8VIG6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TraipQ8VIG6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TraipQ8VIG6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TraipQ8VIG6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TraipQ8VIG6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.13■□□□□ 0.81
TraipQ8VIG6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TraipQ8VIG6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TraipQ8VIG6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TraipQ8VIG6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TraipQ8VIG6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TraipQ8VIG6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TraipQ8VIG6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TraipQ8VIG6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.12■□□□□ 0.81
TraipQ8VIG6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TraipQ8VIG6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
TraipQ8VIG6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TraipQ8VIG6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TraipQ8VIG6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.12■□□□□ 0.81
TraipQ8VIG6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TraipQ8VIG6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TraipQ8VIG6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TraipQ8VIG6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TraipQ8VIG6 Gm37856-201ENSMUST00000191634 999 ntBASIC20.11■□□□□ 0.81
TraipQ8VIG6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TraipQ8VIG6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TraipQ8VIG6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TraipQ8VIG6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TraipQ8VIG6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TraipQ8VIG6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TraipQ8VIG6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TraipQ8VIG6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TraipQ8VIG6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TraipQ8VIG6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TraipQ8VIG6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TraipQ8VIG6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.1■□□□□ 0.81
TraipQ8VIG6 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.1■□□□□ 0.81
TraipQ8VIG6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TraipQ8VIG6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TraipQ8VIG6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TraipQ8VIG6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TraipQ8VIG6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TraipQ8VIG6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TraipQ8VIG6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
TraipQ8VIG6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TraipQ8VIG6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TraipQ8VIG6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TraipQ8VIG6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TraipQ8VIG6 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.09■□□□□ 0.81
TraipQ8VIG6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TraipQ8VIG6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TraipQ8VIG6 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.09■□□□□ 0.81
TraipQ8VIG6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.09■□□□□ 0.81
TraipQ8VIG6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TraipQ8VIG6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.09■□□□□ 0.81
TraipQ8VIG6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TraipQ8VIG6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TraipQ8VIG6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TraipQ8VIG6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
TraipQ8VIG6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TraipQ8VIG6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TraipQ8VIG6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms